D. rerio Gene: si:dkey-17m8.2 - ENSDARG00000035797 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035797
Namesi:dkey-17m8.2
Descriptionsi:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
OrganismDanio rerio (zebrafish)
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.11
  • 66.11
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
  • 1.63e4
65.38
  • 65.38
  • 45.54
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.22
  • 63.22
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.14e4
  • 1.14e4
  • 1.24e4
61.99
  • 61.99
  • 58.45
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
  • 1.37e4
  • 1.38e4
  • 2.15e4
  • 2.60e4
60.56
  • 60.56
  • 54.14
  • 53.84
  • 27.99
  • 12.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.22e4
  • 1.22e4
59.23
  • 59.23
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.27e4
  • 1.27e4
57.55
  • 57.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.90
  • 55.90
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.82
  • 51.82
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.47e4
  • 1.47e4
  • 1.83e4
50.65
  • 50.65
  • 38.85
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.48e4
  • 1.48e4
50.38
  • 50.38
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.64
  • 48.64
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.53
  • 47.53
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.51
  • 47.51
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.15
  • 47.15
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.85
  • 41.85
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.77
  • 41.77
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.13
  • 41.13
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.08
  • 41.08
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.51
  • 39.51
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.30
  • 38.30
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.17
  • 37.17
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.21
  • 32.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Otophysi2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000035797.

Cross-references

EnsemblENSDARG00000035797 (si:dkey-17m8.2)
ZFINZDB-GENE-110411-234 (si:dkey-17m8.2)
EMBLCR749162
Uniprot/SPTREMBLE7F0M0, E7F0M0_DANRE

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