D. rerio Gene: hrh3 - ENSDARG00000035942 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035942
Namehrh3
Descriptionhistamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
OrganismDanio rerio (zebrafish)
Synonym(s)bz34g2.4, si:rp71-34g2.4
Orthologs(s)5 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.96e3
  • 3.96e3
  • 1.26e4
86.75
  • 86.75
  • 57.71
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
77.60
  • 77.60
AEIR
  • AEIR
UBERON:0000203pallium
  • ZFS:0000037Larval:Day 5
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000038Larval:Day 6
7.47e3
  • 7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.07e4
  • 1.07e4
  • 1.46e4
64.19
  • 64.19
  • 51.26
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.09e4
  • 1.09e4
  • 1.10e4
63.54
  • 63.54
  • 63.16
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.20
  • 61.20
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
1.70e4
  • 1.70e4
  • 1.84e4
  • 1.91e4
  • 1.99e4
  • 2.09e4
42.93
  • 42.93
  • 38.30
  • 36.06
  • 33.22
  • 30.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.64
  • 41.64
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.77e4
  • 1.77e4
40.60
  • 40.60
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.81e4
  • 1.81e4
  • 1.92e4
39.44
  • 39.44
  • 35.60
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.09
  • 38.09
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.76
  • 36.76
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.02
  • 27.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000035942.

Cross-references

EnsemblENSDARG00000035942 (hrh3)
ZFINZDB-GENE-040724-204 (hrh3)
EMBLAL928906, BC162722, BC162728
Uniprot/SPTREMBLQ6ZM33, Q6ZM33_DANRE

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