D. rerio Gene: gmnn - ENSDARG00000035957 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035957
Namegmnn
Descriptiongeminin, DNA replication inhibitor [Source:ZFIN;Acc:ZDB-GENE-030429-30]
OrganismDanio rerio (zebrafish)
Synonym(s)sb:cb254, zgc:66217

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
12.9
  • 12.9
99.96
  • 99.96
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
17.0
  • 17.0
  • 34.5
  • 46.3
  • 58.5
  • 566
99.95
  • 99.95
  • 99.89
  • 99.85
  • 99.81
  • 98.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
37.7
  • 37.7
  • 2.43e3
  • 5.23e3
  • 6.50e3
  • 7.19e3
99.88
  • 99.88
  • 91.86
  • 82.49
  • 78.25
  • 75.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • UBERON:0000109gastrula stage
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
113
  • 113
  • 878
  • 890
  • 1.81e3
  • 1.82e3
  • 1.96e3
  • 2.55e3
  • 3.72e3
  • 5.69e3
  • 6.20e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 8.96e3
  • 1.10e4
  • 1.10e4
  • 1.13e4
  • 1.14e4
  • 1.19e4
  • 1.24e4
  • 1.24e4
  • 1.39e4
  • 1.49e4
  • 1.50e4
99.62
  • 99.62
  • 97.06
  • 97.02
  • 93.95
  • 93.90
  • 93.44
  • 91.47
  • 87.53
  • 80.95
  • 79.25
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 69.99
  • 63.26
  • 63.17
  • 62.13
  • 61.67
  • 60.00
  • 58.54
  • 58.51
  • 53.44
  • 49.95
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
154
  • 154
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
188
  • 188
  • 1.50e4
99.37
  • 99.37
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
309
  • 309
98.97
  • 98.97
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
409
  • 409
98.63
  • 98.63
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
430
  • 430
  • 1.11e3
  • 1.12e3
  • 1.16e3
  • 2.09e3
  • 2.86e3
98.56
  • 98.56
  • 96.27
  • 96.26
  • 96.10
  • 93.02
  • 90.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
645
  • 645
97.84
  • 97.84
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
653
  • 653
97.82
  • 97.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
973
  • 973
96.75
  • 96.75
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
96.52
  • 96.52
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.20e3
  • 1.20e3
95.99
  • 95.99
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.46
  • 95.46
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
1.66e3
  • 1.66e3
  • 2.61e3
  • 3.04e3
  • 3.67e3
  • 3.76e3
  • 4.34e3
  • 5.11e3
  • 6.10e3
  • 6.34e3
  • 7.25e3
94.43
  • 94.43
  • 91.27
  • 89.81
  • 87.73
  • 87.42
  • 85.47
  • 82.88
  • 79.58
  • 78.78
  • 75.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.70e3
  • 1.70e3
  • 1.44e4
94.30
  • 94.30
  • 51.84
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.04e3
  • 3.04e3
89.82
  • 89.82
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
3.18e3
  • 3.18e3
  • 9.28e3
89.34
  • 89.34
  • 68.94
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
3.85e3
  • 3.85e3
87.10
  • 87.10
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.06e3
  • 4.06e3
86.40
  • 86.40
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
4.27e3
  • 4.27e3
  • 1.34e4
85.71
  • 85.71
  • 55.24
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
4.33e3
  • 4.33e3
  • 9.91e3
  • 1.21e4
85.51
  • 85.51
  • 66.82
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
4.67e3
  • 4.67e3
  • 4.67e3
  • 5.27e3
  • 5.60e3
  • 5.81e3
  • 6.72e3
  • 7.47e3
  • 7.86e3
84.37
  • 84.37
  • 84.37
  • 82.35
  • 81.24
  • 80.55
  • 77.49
  • 74.99
  • 73.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
4.98e3
  • 4.98e3
  • 5.60e3
  • 6.64e3
  • 6.97e3
  • 6.97e3
83.33
  • 83.33
  • 81.24
  • 77.77
  • 76.66
  • 76.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
5.27e3
  • 5.27e3
  • 5.50e3
  • 6.64e3
  • 6.64e3
  • 7.83e3
  • 7.86e3
  • 7.86e3
82.35
  • 82.35
  • 81.57
  • 77.77
  • 77.77
  • 73.79
  • 73.67
  • 73.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.67e3
  • 5.67e3
81.01
  • 81.01
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
5.98e3
  • 5.98e3
  • 6.50e3
  • 6.72e3
  • 7.08e3
  • 7.83e3
  • 8.22e3
  • 9.07e3
79.99
  • 79.99
  • 78.25
  • 77.49
  • 76.30
  • 73.79
  • 72.48
  • 69.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.05e3
  • 6.05e3
79.73
  • 79.73
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.07e3
  • 6.07e3
79.69
  • 79.69
AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
6.15e3
  • 6.15e3
  • 6.15e3
  • 7.08e3
  • 7.08e3
  • 8.96e3
  • 8.96e3
  • 9.25e3
79.40
  • 79.40
  • 79.40
  • 76.30
  • 76.30
  • 69.98
  • 69.98
  • 69.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000540neuron
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
6.54e3
  • 6.54e3
  • 6.54e3
78.12
  • 78.12
  • 78.12
AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
6.54e3
  • 6.54e3
  • 6.64e3
78.12
  • 78.12
  • 77.77
AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
6.64e3
  • 6.64e3
  • 7.03e3
77.77
  • 77.77
  • 76.46
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
6.64e3
  • 6.64e3
  • 1.35e4
77.77
  • 77.77
  • 54.73
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
6.79e3
  • 6.79e3
  • 7.47e3
  • 8.22e3
  • 8.22e3
  • 8.54e3
77.26
  • 77.26
  • 74.98
  • 72.48
  • 72.48
  • 71.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000040median fin fold
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
6.89e3
  • 6.89e3
  • 8.71e3
  • 8.71e3
76.92
  • 76.92
  • 70.82
  • 70.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.14e3
  • 7.14e3
76.11
  • 76.11
AEIR
  • AEIR
UBERON:2001357alar plate midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 7.86e3
  • 7.86e3
74.99
  • 74.99
  • 73.67
  • 73.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.39
  • 74.39
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
7.80e3
  • 7.80e3
  • 8.22e3
  • 8.22e3
73.90
  • 73.90
  • 72.48
  • 72.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
7.91e3
  • 7.91e3
  • 7.91e3
  • 7.91e3
  • 1.24e4
73.52
  • 73.52
  • 73.52
  • 73.52
  • 58.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000926mesoderm
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
7.97e3
  • 7.97e3
  • 7.97e3
  • 8.40e3
  • 1.10e4
  • 1.10e4
  • 1.10e4
73.32
  • 73.32
  • 73.32
  • 71.86
  • 63.32
  • 63.32
  • 63.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.43e3
  • 8.43e3
  • 9.29e3
  • 1.44e4
71.77
  • 71.77
  • 68.89
  • 51.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.97e3
  • 8.97e3
69.96
  • 69.96
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.10e3
  • 9.10e3
  • 9.96e3
  • 9.96e3
69.55
  • 69.55
  • 66.65
  • 66.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.14e3
  • 9.14e3
  • 1.30e4
69.41
  • 69.41
  • 56.56
AEIR
  • AEIR
  • AEIR
UBERON:2000001Kupffer's vesicle
  • ZFS:0000023Segmentation:1-4 somites
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.05e4
  • 1.05e4
  • 1.09e4
  • 1.09e4
64.98
  • 64.98
  • 63.61
  • 63.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
1.10e4
  • 1.10e4
  • 1.10e4
  • 1.14e4
63.14
  • 63.14
  • 63.14
  • 61.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003081lateral plate mesoderm
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.12e4
  • 1.12e4
  • 1.31e4
62.50
  • 62.50
  • 56.24
AEIR
  • AEIR
  • AEIR
UBERON:0003062primitive knot
  • ZFS:0000019Gastrula:Shield
1.22e4
  • 1.22e4
59.08
  • 59.08
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
  • 1.30e4
58.12
  • 58.12
  • 56.63
AEIR
  • AEIR
  • AEIR
UBERON:0004879marginal zone of embryo
  • ZFS:0000019Gastrula:Shield
1.34e4
  • 1.34e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.14
  • 53.14
AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
1.41e4
  • 1.41e4
  • 1.49e4
52.92
  • 52.92
  • 50.00
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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