D. rerio Gene: cited4a - ENSDARG00000035990 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035990
Namecited4a
DescriptionCbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a [Source:ZFIN;Acc:ZDB-GENE-030131-7661]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-218l8.1, wu:fj77b06, wu:fk59f02, zgc:153140

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
316
  • 316
98.95
  • 98.95
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
512
  • 512
  • 5.84e3
98.29
  • 98.29
  • 80.46
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
969
  • 969
96.76
  • 96.76
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.29e3
  • 1.29e3
95.69
  • 95.69
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.45
  • 95.45
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.68e3
  • 1.68e3
  • 5.16e3
  • 8.79e3
  • 8.97e3
94.39
  • 94.39
  • 82.73
  • 70.56
  • 69.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.72e3
  • 1.72e3
  • 2.42e3
94.25
  • 94.25
  • 91.92
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.87e3
  • 1.87e3
  • 2.54e3
  • 3.41e3
  • 3.43e3
  • 3.44e3
  • 3.59e3
  • 3.68e3
  • 4.27e3
  • 5.33e3
  • 6.09e3
  • 6.60e3
  • 6.72e3
  • 7.69e3
  • 8.32e3
  • 1.43e4
  • 1.44e4
  • 1.50e4
93.75
  • 93.75
  • 91.51
  • 88.59
  • 88.53
  • 88.47
  • 87.99
  • 87.68
  • 85.69
  • 82.17
  • 79.62
  • 77.91
  • 77.51
  • 74.26
  • 72.13
  • 51.99
  • 51.82
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
2.11e3
  • 2.11e3
  • 3.21e3
  • 3.43e3
  • 3.63e3
  • 5.16e3
  • 5.65e3
  • 5.96e3
  • 5.98e3
  • 6.07e3
  • 1.02e4
92.94
  • 92.94
  • 89.27
  • 88.51
  • 87.85
  • 82.72
  • 81.07
  • 80.04
  • 79.98
  • 79.67
  • 65.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
92.23
  • 92.23
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.42e3
  • 2.42e3
91.90
  • 91.90
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.86e3
  • 2.86e3
  • 3.87e3
  • 4.25e3
90.43
  • 90.43
  • 87.03
  • 85.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.86e3
  • 2.86e3
90.42
  • 90.42
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.87e3
  • 2.87e3
90.40
  • 90.40
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.90e3
  • 2.90e3
90.29
  • 90.29
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
3.00e3
  • 3.00e3
  • 3.43e3
89.97
  • 89.97
  • 88.50
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.16e3
  • 3.16e3
89.42
  • 89.42
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.76e3
  • 3.76e3
87.42
  • 87.42
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.34e3
  • 4.34e3
  • 7.03e3
85.49
  • 85.49
  • 76.45
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.41e3
  • 4.41e3
85.23
  • 85.23
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.52e3
  • 4.52e3
84.88
  • 84.88
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
4.68e3
  • 4.68e3
  • 4.88e3
  • 6.04e3
  • 6.15e3
  • 7.11e3
  • 8.89e3
84.33
  • 84.33
  • 83.65
  • 79.78
  • 79.41
  • 76.20
  • 70.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.23e3
  • 5.23e3
82.49
  • 82.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.99e3
  • 6.99e3
76.59
  • 76.59
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
7.03e3
  • 7.03e3
  • 7.15e3
  • 1.27e4
  • 1.30e4
  • 1.33e4
76.48
  • 76.48
  • 76.05
  • 57.31
  • 56.41
  • 55.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
7.71e3
  • 7.71e3
  • 1.50e4
74.18
  • 74.18
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
71.47
  • 71.47
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.69e3
  • 8.69e3
70.89
  • 70.89
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.53e3
  • 9.53e3
68.09
  • 68.09
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.03e4
  • 1.03e4
65.38
  • 65.38
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.10e4
  • 1.10e4
63.27
  • 63.27
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.32
  • 56.32
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.36e4
  • 1.36e4
54.39
  • 54.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR356241, CR631129
EnsemblENSDARG00000035990 (cited4a)
Uniprot/SPTREMBLQ1L8S4, Q1L8S4_DANRE
ZFINZDB-GENE-030131-7661 (cited4a)

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