D. rerio Gene: tradd - ENSDARG00000036057 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036057
Nametradd
Descriptiontnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fc59e02, zgc:103556

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.60e3
  • 2.60e3
  • 1.50e4
91.30
  • 91.30
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
2.74e3
  • 2.74e3
  • 7.11e3
  • 7.82e3
  • 7.88e3
  • 7.90e3
  • 7.98e3
  • 8.03e3
  • 8.03e3
  • 8.25e3
  • 8.47e3
  • 9.05e3
  • 9.13e3
  • 9.90e3
  • 1.15e4
  • 1.43e4
  • 1.50e4
90.83
  • 90.83
  • 76.20
  • 73.83
  • 73.63
  • 73.55
  • 73.29
  • 73.12
  • 73.11
  • 72.39
  • 71.63
  • 69.70
  • 69.43
  • 66.85
  • 61.45
  • 52.23
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.79e3
  • 2.79e3
90.66
  • 90.66
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.82e3
  • 2.82e3
90.56
  • 90.56
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.99e3
  • 2.99e3
90.00
  • 90.00
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
3.02e3
  • 3.02e3
  • 3.92e3
  • 4.52e3
  • 8.61e3
  • 9.07e3
89.88
  • 89.88
  • 86.88
  • 84.87
  • 71.18
  • 69.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.69e3
  • 3.69e3
87.65
  • 87.65
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.83e3
  • 3.83e3
87.18
  • 87.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.83
  • 86.83
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.77e3
  • 4.77e3
84.03
  • 84.03
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.42
  • 83.42
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.02e3
  • 5.02e3
83.21
  • 83.21
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
82.21
  • 82.21
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.33e3
  • 5.33e3
82.15
  • 82.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.51e3
  • 5.51e3
81.56
  • 81.56
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.62e3
  • 5.62e3
81.19
  • 81.19
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.65
  • 78.65
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
6.60e3
  • 6.60e3
  • 7.72e3
  • 7.76e3
  • 8.33e3
  • 8.37e3
  • 8.81e3
  • 8.83e3
  • 1.03e4
  • 1.30e4
  • 1.37e4
77.91
  • 77.91
  • 74.14
  • 74.03
  • 72.12
  • 71.98
  • 70.51
  • 70.42
  • 65.66
  • 56.45
  • 53.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.64e3
  • 6.64e3
  • 7.96e3
77.76
  • 77.76
  • 73.35
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
6.79e3
  • 6.79e3
  • 7.63e3
  • 1.15e4
77.27
  • 77.27
  • 74.44
  • 61.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
7.28e3
  • 7.28e3
  • 7.83e3
  • 7.87e3
  • 8.35e3
  • 8.75e3
  • 9.35e3
75.63
  • 75.63
  • 73.78
  • 73.63
  • 72.06
  • 70.71
  • 68.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.49e3
  • 7.49e3
  • 1.39e4
74.93
  • 74.93
  • 53.40
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.68e3
  • 7.68e3
  • 9.05e3
  • 1.07e4
74.28
  • 74.28
  • 69.70
  • 64.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.69e3
  • 7.69e3
74.24
  • 74.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.04e3
  • 8.04e3
  • 1.50e4
73.09
  • 73.09
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.60e3
  • 8.60e3
  • 1.36e4
71.19
  • 71.19
  • 54.42
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.84e3
  • 8.84e3
70.39
  • 70.39
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.07e3
  • 9.07e3
69.64
  • 69.64
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.55
  • 65.55
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.07e4
  • 1.07e4
64.26
  • 64.26
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.11e4
  • 1.11e4
62.72
  • 62.72
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.14e4
  • 1.14e4
  • 1.21e4
  • 1.31e4
61.71
  • 61.71
  • 59.58
  • 56.21
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLAF231014, BC083425, BC164053, CR352249
EnsemblENSDARG00000036057 (tradd)
Uniprot/SPTREMBLB2GNQ4, B2GNQ4_DANRE
Uniprot/SWISSPROTQ9I9N5, TRADD_DANRE
ZFINZDB-GENE-000511-5 (tradd)

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