D. rerio Gene: cebpa - ENSDARG00000036074 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036074
Namecebpa
DescriptionCCAAT/enhancer binding protein (C/EBP), alpha [Source:ZFIN;Acc:ZDB-GENE-020111-2]
OrganismDanio rerio (zebrafish)
Synonym(s)c/ebpa, cb1062, chunp6777, fj20f03, wu:fj20f03
Orthologs(s)10 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
290
  • 290
99.03
  • 99.03
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
955
  • 955
96.81
  • 96.81
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.40e3
  • 1.40e3
  • 2.69e3
95.31
  • 95.31
  • 90.98
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000014Blastula:Sphere
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.52e3
  • 1.52e3
  • 2.04e3
  • 2.48e3
  • 2.54e3
  • 3.21e3
  • 3.50e3
  • 3.69e3
  • 3.79e3
  • 4.74e3
  • 4.77e3
  • 4.83e3
  • 5.32e3
  • 7.92e3
  • 8.96e3
  • 1.38e4
  • 1.49e4
94.91
  • 94.91
  • 93.16
  • 91.71
  • 91.48
  • 89.27
  • 88.27
  • 87.65
  • 87.32
  • 84.12
  • 84.05
  • 83.82
  • 82.20
  • 73.49
  • 69.99
  • 53.74
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.96e3
  • 1.96e3
93.44
  • 93.44
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.06e3
  • 2.06e3
93.11
  • 93.11
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.11e3
  • 2.11e3
92.95
  • 92.95
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.19e3
  • 2.19e3
  • 1.19e4
92.67
  • 92.67
  • 60.00
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.43e3
  • 2.43e3
  • 4.14e3
  • 4.79e3
  • 5.24e3
  • 5.26e3
  • 5.27e3
  • 5.36e3
  • 5.85e3
  • 6.58e3
  • 7.91e3
91.87
  • 91.87
  • 86.13
  • 83.95
  • 82.45
  • 82.38
  • 82.36
  • 82.05
  • 80.41
  • 77.97
  • 73.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.73e3
  • 2.73e3
90.87
  • 90.87
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.74e3
  • 2.74e3
90.81
  • 90.81
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
2.90e3
  • 2.90e3
  • 2.93e3
  • 3.20e3
  • 3.47e3
  • 4.33e3
  • 4.74e3
90.29
  • 90.29
  • 90.18
  • 89.28
  • 88.37
  • 85.50
  • 84.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.57e3
  • 3.57e3
  • 4.06e3
  • 5.34e3
88.07
  • 88.07
  • 86.40
  • 82.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
3.64e3
  • 3.64e3
  • 5.69e3
  • 8.71e3
  • 1.10e4
  • 1.12e4
87.82
  • 87.82
  • 80.94
  • 70.82
  • 63.32
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
3.96e3
  • 3.96e3
  • 7.06e3
  • 1.21e4
86.74
  • 86.74
  • 76.37
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.21e3
  • 4.21e3
  • 1.03e4
85.91
  • 85.91
  • 65.43
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.82e3
  • 5.82e3
80.51
  • 80.51
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
5.86e3
  • 5.86e3
  • 9.18e3
  • 1.49e4
80.38
  • 80.38
  • 69.27
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.23e3
  • 6.23e3
79.14
  • 79.14
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.66e3
  • 6.66e3
77.72
  • 77.72
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
76.61
  • 76.61
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.07
  • 76.07
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
8.40e3
  • 8.40e3
  • 1.15e4
  • 1.17e4
  • 1.17e4
  • 1.29e4
  • 1.50e4
71.86
  • 71.86
  • 61.53
  • 60.70
  • 60.70
  • 56.65
  • 49.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009910posterior lateral plate mesoderm
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000025Segmentation:10-13 somites
8.96e3
  • 8.96e3
  • 1.07e4
  • 1.49e4
  • 1.49e4
70.00
  • 70.00
  • 64.28
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
9.06e3
  • 9.06e3
  • 1.06e4
69.67
  • 69.67
  • 64.50
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.69e3
  • 9.69e3
67.54
  • 67.54
AEIR
  • AEIR
ZFA:0005738intestinal bulb primordium (Danio)
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
  • 9.96e3
66.66
  • 66.66
  • 66.66
AEIR
  • AEIR
  • AEIR
CL:0000235macrophage
  • ZFS:0000026Segmentation:14-19 somites
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
  • 9.96e3
66.66
  • 66.66
  • 66.66
AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
9.96e3
  • 9.96e3
  • 1.07e4
  • 1.10e4
  • 1.10e4
  • 1.10e4
  • 1.23e4
  • 1.26e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.31e4
  • 1.32e4
  • 1.32e4
66.65
  • 66.65
  • 64.27
  • 63.32
  • 63.32
  • 63.32
  • 58.80
  • 57.68
  • 57.13
  • 57.13
  • 57.13
  • 56.23
  • 55.86
  • 55.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
9.99e3
  • 9.99e3
66.57
  • 66.57
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.04e4
  • 1.04e4
65.02
  • 65.02
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.14e4
  • 1.21e4
  • 1.34e4
  • 1.34e4
  • 1.42e4
62.48
  • 62.48
  • 62.48
  • 61.75
  • 59.36
  • 54.97
  • 54.97
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009881anterior lateral plate mesoderm
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
1.16e4
  • 1.16e4
  • 1.24e4
  • 1.28e4
  • 1.49e4
61.10
  • 61.10
  • 58.33
  • 57.14
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.20e4
  • 1.20e4
  • 1.28e4
  • 1.34e4
59.98
  • 59.98
  • 57.13
  • 55.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.23e4
  • 1.23e4
  • 1.23e4
58.80
  • 58.80
  • 58.80
AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
1.23e4
  • 1.23e4
58.80
  • 58.80
AEIR
  • AEIR
CL:0000763myeloid cell
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
1.24e4
  • 1.24e4
  • 1.49e4
  • 1.49e4
58.33
  • 58.33
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003894liver primordium
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
58.32
  • 58.32
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.50e4
55.16
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0002390hematopoietic system
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000309E-YSL
  • ZFS:0000019Gastrula:Shield
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000049common myeloid progenitor
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000557granulocyte monocyte progenitor cell
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001007digestive system
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.61e4
  • 1.61e4
46.14
  • 46.14
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.47
  • 43.47
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.51
  • 40.51
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.13e4
  • 2.13e4
28.70
  • 28.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

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