D. rerio Gene: ctdsp2 - ENSDARG00000036102 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036102
Namectdsp2
DescriptionCTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
OrganismDanio rerio (zebrafish)
Synonym(s)fb16c04, wu:fb16c04, zgc:77714

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
589
  • 589
  • 2.86e3
  • 5.60e3
  • 6.61e3
98.03
  • 98.03
  • 90.43
  • 81.23
  • 77.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
750
  • 750
  • 1.84e3
  • 1.84e3
  • 2.36e3
  • 2.42e3
  • 3.42e3
  • 3.44e3
  • 4.18e3
  • 4.61e3
  • 5.41e3
97.49
  • 97.49
  • 93.85
  • 93.85
  • 92.12
  • 91.90
  • 88.55
  • 88.47
  • 86.00
  • 84.57
  • 81.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
848
  • 848
97.16
  • 97.16
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
984
  • 984
96.71
  • 96.71
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
96.45
  • 96.45
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.10e3
  • 1.10e3
96.31
  • 96.31
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.12e3
  • 1.12e3
  • 2.15e3
96.26
  • 96.26
  • 92.81
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.18e3
  • 1.18e3
  • 1.53e3
96.06
  • 96.06
  • 94.89
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.21e3
  • 1.21e3
  • 1.56e3
  • 1.67e3
95.95
  • 95.95
  • 94.76
  • 94.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000049segmentation
1.33e3
  • 1.33e3
  • 1.85e3
  • 2.18e3
  • 3.05e3
  • 3.58e3
  • 4.00e3
  • 4.17e3
  • 4.18e3
  • 5.69e3
  • 6.80e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 7.97e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.51e3
  • 8.51e3
  • 8.71e3
  • 8.71e3
  • 8.79e3
  • 9.61e3
  • 9.96e3
  • 9.96e3
  • 1.19e4
  • 1.26e4
  • 1.34e4
  • 1.39e4
  • 1.47e4
  • 1.49e4
95.54
  • 95.54
  • 93.81
  • 92.71
  • 89.79
  • 88.02
  • 86.60
  • 86.03
  • 85.99
  • 80.95
  • 77.24
  • 74.99
  • 74.99
  • 73.52
  • 73.32
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 71.52
  • 71.52
  • 70.82
  • 70.82
  • 70.57
  • 67.84
  • 66.65
  • 66.65
  • 60.04
  • 57.93
  • 55.06
  • 53.30
  • 50.90
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
1.64e3
  • 1.64e3
  • 2.46e3
  • 1.45e4
94.52
  • 94.52
  • 91.75
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
94.22
  • 94.22
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.31
  • 93.31
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.06e3
  • 2.06e3
93.12
  • 93.12
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.30e3
  • 2.30e3
92.29
  • 92.29
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.86e3
  • 2.86e3
90.41
  • 90.41
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.88e3
  • 2.88e3
90.36
  • 90.36
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.07e3
  • 3.07e3
89.73
  • 89.73
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.46e3
  • 3.46e3
88.43
  • 88.43
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.60e3
  • 3.60e3
87.94
  • 87.94
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.68e3
  • 3.68e3
87.69
  • 87.69
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.06e3
  • 5.06e3
83.06
  • 83.06
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.66e3
  • 5.66e3
81.04
  • 81.04
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
5.89e3
  • 5.89e3
  • 8.42e3
  • 9.67e3
  • 9.96e3
  • 1.02e4
  • 1.30e4
80.27
  • 80.27
  • 71.82
  • 67.64
  • 66.66
  • 65.77
  • 56.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.41e3
  • 6.41e3
78.53
  • 78.53
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
77.33
  • 77.33
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.94e3
  • 8.94e3
70.06
  • 70.06
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
1.14e4
  • 1.14e4
  • 1.18e4
  • 1.45e4
61.66
  • 61.66
  • 60.56
  • 51.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.28e4
  • 1.28e4
57.22
  • 57.22
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.46e4
57.14
  • 57.14
  • 51.26
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC063974, BX957326
EnsemblENSDARG00000036102 (ctdsp2)
Uniprot/SPTREMBLQ6P3I6, Q6P3I6_DANRE
ZFINZDB-GENE-030131-184 (ctdsp2)

Do not show this banner again