D. rerio Gene: trpm7 - ENSDARG00000036232 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036232
Nametrpm7
Descriptiontransient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
OrganismDanio rerio (zebrafish)
Synonym(s)cb495, nutria, tct, touchtone, transient receptor potential melastatin 7

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.09e3
  • 1.09e3
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.39e3
  • 1.39e3
95.34
  • 95.34
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.57e3
  • 1.57e3
94.75
  • 94.75
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
1.60e3
  • 1.60e3
  • 3.60e3
  • 4.35e3
  • 4.92e3
  • 5.04e3
  • 5.68e3
  • 6.18e3
  • 6.24e3
  • 6.25e3
  • 6.55e3
  • 6.66e3
  • 6.72e3
  • 6.88e3
  • 7.28e3
94.64
  • 94.64
  • 87.95
  • 85.44
  • 83.52
  • 83.12
  • 81.00
  • 79.30
  • 79.12
  • 79.06
  • 78.08
  • 77.72
  • 77.49
  • 76.97
  • 75.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.69e3
  • 1.69e3
  • 5.45e3
  • 5.51e3
  • 1.19e4
94.35
  • 94.35
  • 81.76
  • 81.54
  • 60.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.75e3
  • 1.75e3
94.14
  • 94.14
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
1.95e3
  • 1.95e3
  • 2.04e3
  • 2.39e3
  • 2.48e3
  • 2.61e3
93.49
  • 93.49
  • 93.16
  • 91.99
  • 91.69
  • 91.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009622pronephric proximal straight tubule
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000037Larval:Day 5
2.13e3
  • 2.13e3
  • 3.73e3
  • 3.73e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
92.86
  • 92.86
  • 87.50
  • 87.50
  • 75.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
2.75e3
  • 2.75e3
  • 2.99e3
  • 5.60e3
  • 7.25e3
  • 7.27e3
  • 8.03e3
90.80
  • 90.80
  • 90.00
  • 81.26
  • 75.71
  • 75.66
  • 73.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.23e3
  • 3.23e3
  • 3.67e3
89.19
  • 89.19
  • 87.72
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.33e3
  • 3.33e3
88.84
  • 88.84
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.51e3
  • 3.51e3
88.26
  • 88.26
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.72e3
  • 3.72e3
87.55
  • 87.55
AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
3.73e3
  • 3.73e3
  • 6.40e3
  • 1.19e4
  • 1.31e4
  • 1.38e4
  • 1.49e4
87.50
  • 87.50
  • 78.56
  • 59.99
  • 56.24
  • 53.83
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.16
  • 86.16
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.19e3
  • 4.19e3
85.97
  • 85.97
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000041Larval:Days 21-29
4.49e3
  • 4.49e3
  • 1.49e4
84.98
  • 84.98
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.56e3
  • 4.56e3
84.73
  • 84.73
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.62e3
  • 4.62e3
  • 1.04e4
84.54
  • 84.54
  • 65.19
AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
4.67e3
  • 4.67e3
  • 4.67e3
  • 5.98e3
  • 6.72e3
  • 7.08e3
  • 9.67e3
  • 1.03e4
84.37
  • 84.37
  • 84.37
  • 79.99
  • 77.49
  • 76.30
  • 67.63
  • 65.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.88e3
  • 4.88e3
83.68
  • 83.68
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
5.18e3
  • 5.18e3
  • 5.22e3
  • 5.48e3
  • 5.88e3
  • 6.18e3
  • 6.44e3
  • 6.54e3
  • 6.73e3
  • 7.32e3
  • 1.07e4
82.67
  • 82.67
  • 82.53
  • 81.65
  • 80.32
  • 79.31
  • 78.44
  • 78.11
  • 77.48
  • 75.49
  • 64.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.18e3
  • 5.18e3
82.64
  • 82.64
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.22e3
  • 5.22e3
82.53
  • 82.53
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.26e3
  • 5.26e3
82.38
  • 82.38
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.32e3
  • 5.32e3
  • 8.14e3
82.19
  • 82.19
  • 72.73
AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
5.50e3
  • 5.50e3
  • 5.98e3
  • 1.29e4
81.57
  • 81.57
  • 79.99
  • 56.65
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000319mucus secreting cell
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
5.75e3
  • 5.75e3
  • 5.75e3
  • 5.75e3
80.76
  • 80.76
  • 80.76
  • 80.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.75e3
  • 5.75e3
  • 5.75e3
80.76
  • 80.76
  • 80.76
AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
5.98e3
  • 5.98e3
  • 6.54e3
  • 7.83e3
79.99
  • 79.99
  • 78.12
  • 73.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
5.98e3
  • 5.98e3
  • 6.15e3
  • 6.54e3
79.99
  • 79.99
  • 79.40
  • 78.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.98e3
  • 5.98e3
79.97
  • 79.97
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.02e3
  • 6.02e3
79.85
  • 79.85
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.10
  • 79.10
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.62e3
  • 6.62e3
77.85
  • 77.85
AEIR
  • AEIR
UBERON:0003073lens placode
  • ZFS:0000026Segmentation:14-19 somites
6.64e3
  • 6.64e3
77.77
  • 77.77
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.74e3
  • 6.74e3
77.43
  • 77.43
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.99e3
  • 6.99e3
  • 7.99e3
  • 1.12e4
76.59
  • 76.59
  • 73.26
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.55e3
  • 7.55e3
  • 8.00e3
  • 8.07e3
74.74
  • 74.74
  • 73.23
  • 72.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001892rhombomere
  • ZFS:0000026Segmentation:14-19 somites
8.54e3
  • 8.54e3
71.42
  • 71.42
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
8.79e3
  • 8.79e3
  • 9.13e3
  • 9.71e3
70.57
  • 70.57
  • 69.43
  • 67.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003052midbrain-hindbrain boundary
  • ZFS:0000026Segmentation:14-19 somites
9.34e3
  • 9.34e3
68.74
  • 68.74
AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
9.44e3
  • 9.44e3
68.40
  • 68.40
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.90e3
  • 9.90e3
66.84
  • 66.84
AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000029Pharyngula:Prim-5
1.42e4
  • 1.42e4
52.35
  • 52.35
AEIR
  • AEIR
CL:0005006ionocyte
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2001200corpuscles of Stannius
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0001290proximal straight tubule
  • ZFS:0000041Larval:Days 21-29
  • ZFS:0000039Larval:Days 7-13
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0007298pronephric proximal convoluted tubule
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000247Rohon-Beard neuron
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000036232 (trpm7)
Uniprot/SPTREMBLF8W297, F8W297_DANRE, F8W4J6, F8W4J6_DANRE
ZFINZDB-GENE-021115-2 (trpm7)

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