D. rerio Gene: CC2D1A - ENSDARG00000036281 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036281
NameCC2D1A
Descriptioncoiled-coil and C2 domain containing 1A [Source:HGNC Symbol;Acc:HGNC:30237]
OrganismDanio rerio (zebrafish)
Synonym(s)flj20241, mrt3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
5.77e3
  • 5.77e3
  • 6.99e3
  • 1.04e4
  • 1.09e4
  • 1.09e4
80.70
  • 80.70
  • 76.58
  • 65.15
  • 63.53
  • 63.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.09e3
  • 6.09e3
  • 6.22e3
79.62
  • 79.62
  • 79.17
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.28e3
  • 6.28e3
78.97
  • 78.97
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.37e3
  • 7.37e3
75.32
  • 75.32
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.64e3
  • 7.64e3
74.41
  • 74.41
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
7.97e3
  • 7.97e3
  • 8.62e3
  • 9.67e3
  • 1.10e4
  • 1.11e4
  • 1.13e4
  • 1.17e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
73.33
  • 73.33
  • 71.13
  • 67.63
  • 63.27
  • 62.68
  • 62.11
  • 60.91
  • 59.79
  • 58.70
  • 58.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.37e3
  • 8.37e3
71.96
  • 71.96
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.41e3
  • 8.41e3
71.84
  • 71.84
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.89e3
  • 8.89e3
70.23
  • 70.23
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
69.94
  • 69.94
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.07e3
  • 9.07e3
69.62
  • 69.62
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.11e3
  • 9.11e3
  • 9.54e3
69.49
  • 69.49
  • 68.05
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.72
  • 68.72
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
9.70e3
  • 9.70e3
  • 9.92e3
  • 1.00e4
  • 1.06e4
  • 1.12e4
  • 1.25e4
67.54
  • 67.54
  • 66.79
  • 66.36
  • 64.54
  • 62.58
  • 58.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.86e3
  • 9.86e3
67.00
  • 67.00
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.02e4
  • 1.02e4
65.78
  • 65.78
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.03e4
  • 1.03e4
  • 1.04e4
  • 1.08e4
65.47
  • 65.47
  • 65.28
  • 63.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.04e4
  • 1.04e4
  • 1.08e4
65.03
  • 65.03
  • 63.82
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.54
  • 64.54
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.54
  • 63.54
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.10e4
  • 1.10e4
63.15
  • 63.15
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.10e4
  • 1.10e4
63.01
  • 63.01
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.11e4
  • 1.11e4
62.68
  • 62.68
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.97
  • 61.97
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
1.14e4
  • 1.14e4
  • 1.23e4
  • 1.26e4
  • 1.26e4
  • 1.26e4
  • 1.28e4
  • 1.31e4
  • 1.32e4
  • 1.33e4
  • 1.33e4
  • 1.36e4
  • 1.39e4
  • 1.39e4
  • 1.40e4
61.96
  • 61.96
  • 58.87
  • 57.96
  • 57.91
  • 57.69
  • 57.16
  • 56.01
  • 55.93
  • 55.55
  • 55.31
  • 54.62
  • 53.45
  • 53.42
  • 53.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.15e4
  • 1.15e4
  • 1.28e4
  • 1.51e4
61.48
  • 61.48
  • 56.99
  • 49.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.78
  • 60.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.37
  • 60.37
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.58
  • 57.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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