D. rerio Gene: rps13 - ENSDARG00000036298 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036298
Namerps13
Descriptionribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
OrganismDanio rerio (zebrafish)
Synonym(s)fb14f11, fd13f08, fd60g01, wu:fb14f11, wu:fd13f08, wu:fd60g01, zgc:91809

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
35.5
  • 35.5
  • 64.0
99.88
  • 99.88
  • 99.79
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
49.0
  • 49.0
  • 73.2
99.84
  • 99.84
  • 99.76
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
58.7
  • 58.7
  • 86.5
  • 99.9
  • 110
  • 157
99.81
  • 99.81
  • 99.71
  • 99.67
  • 99.64
  • 99.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
62.0
  • 62.0
99.80
  • 99.80
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
69.0
  • 69.0
  • 187
99.77
  • 99.77
  • 99.38
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
72.7
  • 72.7
  • 1.57e3
99.76
  • 99.76
  • 94.76
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
82.7
  • 82.7
99.73
  • 99.73
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
88.0
  • 88.0
99.71
  • 99.71
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
104
  • 104
99.66
  • 99.66
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
109
  • 109
99.64
  • 99.64
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
118
  • 118
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
119
  • 119
99.60
  • 99.60
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
133
  • 133
99.56
  • 99.56
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
133
  • 133
99.56
  • 99.56
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
146
  • 146
99.51
  • 99.51
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
153
  • 153
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
156
  • 156
99.48
  • 99.48
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
187
  • 187
  • 343
99.38
  • 99.38
  • 98.86
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
238
  • 238
99.20
  • 99.20
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
247
  • 247
99.18
  • 99.18
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
272
  • 272
99.09
  • 99.09
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
278
  • 278
99.07
  • 99.07
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
297
  • 297
99.01
  • 99.01
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.86e3
  • 2.86e3
90.44
  • 90.44
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.75e3
  • 4.75e3
84.08
  • 84.08
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.35
  • 60.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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