D. rerio Gene: phf23b - ENSDARG00000036305 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036305
Namephf23b
DescriptionPHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
OrganismDanio rerio (zebrafish)
Synonym(s)q503k5, wu:fi23e08, zgc:110484, zgc:66469

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.96e3
  • 1.96e3
  • 2.14e3
  • 2.38e3
  • 3.30e3
  • 4.30e3
93.43
  • 93.43
  • 92.85
  • 92.05
  • 88.95
  • 85.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.45e3
  • 2.45e3
91.81
  • 91.81
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.19e3
  • 3.19e3
  • 4.94e3
  • 6.85e3
  • 9.51e3
89.32
  • 89.32
  • 83.48
  • 77.08
  • 68.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
3.35e3
  • 3.35e3
  • 4.97e3
  • 4.98e3
  • 5.14e3
  • 5.25e3
  • 5.68e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.81e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.19e3
  • 8.84e3
  • 8.96e3
  • 8.96e3
  • 9.43e3
  • 9.50e3
  • 1.04e4
  • 1.08e4
  • 1.13e4
  • 1.13e4
  • 1.34e4
  • 1.46e4
  • 1.50e4
88.79
  • 88.79
  • 83.37
  • 83.33
  • 82.79
  • 82.43
  • 80.99
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.20
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 72.58
  • 70.41
  • 69.99
  • 69.99
  • 68.43
  • 68.19
  • 65.34
  • 63.95
  • 62.26
  • 62.21
  • 55.05
  • 51.01
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
3.89e3
  • 3.89e3
  • 4.32e3
  • 4.46e3
  • 4.93e3
  • 5.04e3
  • 5.10e3
86.97
  • 86.97
  • 85.55
  • 85.07
  • 83.48
  • 83.11
  • 82.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
86.71
  • 86.71
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
86.67
  • 86.67
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.13e3
  • 4.13e3
  • 7.54e3
86.16
  • 86.16
  • 74.76
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.40e3
  • 4.40e3
85.28
  • 85.28
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.00e3
  • 5.00e3
83.24
  • 83.24
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.35e3
  • 5.35e3
82.09
  • 82.09
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.82e3
  • 5.82e3
80.51
  • 80.51
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.83e3
  • 5.83e3
80.48
  • 80.48
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.95e3
  • 5.95e3
80.08
  • 80.08
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.01e3
  • 6.01e3
  • 6.56e3
79.89
  • 79.89
  • 78.04
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
6.24e3
  • 6.24e3
  • 6.45e3
  • 6.68e3
  • 6.76e3
  • 7.08e3
  • 7.22e3
  • 7.71e3
  • 7.76e3
  • 7.79e3
  • 9.43e3
79.10
  • 79.10
  • 78.41
  • 77.63
  • 77.38
  • 76.30
  • 75.81
  • 74.17
  • 74.01
  • 73.93
  • 68.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.27e3
  • 6.27e3
79.01
  • 79.01
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.46e3
  • 6.46e3
  • 7.75e3
78.36
  • 78.36
  • 74.04
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.56e3
  • 6.56e3
78.03
  • 78.03
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.62e3
  • 6.62e3
77.85
  • 77.85
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.82e3
  • 6.82e3
77.18
  • 77.18
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.93e3
  • 6.93e3
76.81
  • 76.81
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.04e3
  • 7.04e3
76.43
  • 76.43
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
76.11
  • 76.11
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.21e3
  • 7.21e3
75.86
  • 75.86
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.35e3
  • 7.35e3
  • 8.63e3
75.39
  • 75.39
  • 71.09
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.42e3
  • 7.42e3
75.16
  • 75.16
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.69e3
  • 7.69e3
74.26
  • 74.26
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
73.13
  • 73.13
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.11e3
  • 8.11e3
72.84
  • 72.84
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
8.35e3
  • 8.35e3
  • 8.98e3
  • 8.99e3
72.05
  • 72.05
  • 69.92
  • 69.89
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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