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D. rerio Gene: cers3b - ENSDARG00000036337 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036337
Namecers3b
Descriptionceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
OrganismDanio rerio (zebrafish)
Synonym(s)cers3, zgc:171494
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000020Gastrula:75%-epiboly
6.64e3
  • 6.64e3
  • 7.47e3
77.77
  • 77.77
  • 74.99
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.25
  • 77.25
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.79e3
  • 8.79e3
70.57
  • 70.57
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.59e3
  • 9.59e3
67.88
  • 67.88
AEIR
  • AEIR
UBERON:0000160intestine
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.96e3
  • 9.96e3
  • 1.06e4
66.67
  • 66.67
  • 64.37
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
  • 1.46e4
62.48
  • 62.48
  • 50.99
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
  • 1.22e4
  • 1.54e4
59.99
  • 59.99
  • 59.08
  • 48.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
1.21e4
  • 1.21e4
59.36
  • 59.36
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.82
  • 58.82
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.32e4
  • 1.32e4
  • 1.64e4
55.64
  • 55.64
  • 45.07
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
  • 1.48e4
  • 1.48e4
  • 1.62e4
  • 1.67e4
55.52
  • 55.52
  • 50.57
  • 50.55
  • 45.63
  • 44.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.34e4
  • 1.34e4
  • 1.35e4
  • 1.49e4
54.97
  • 54.97
  • 54.96
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.34e4
  • 1.34e4
  • 1.41e4
54.97
  • 54.97
  • 52.75
AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.34e4
  • 1.34e4
  • 1.49e4
54.97
  • 54.97
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.36e4
  • 1.36e4
54.42
  • 54.42
AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
1.42e4
  • 1.42e4
52.60
  • 52.60
AEIR
  • AEIR
UBERON:0008896post-hyoid pharyngeal arch
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.54e4
  • 1.54e4
48.60
  • 48.60
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.55e4
  • 1.55e4
  • 1.62e4
47.93
  • 47.93
  • 45.84
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.58e4
  • 1.58e4
47.10
  • 47.10
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.98
  • 46.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.28
  • 46.28
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.04
  • 46.04
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.25
  • 43.25
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.43
  • 42.43
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.16
  • 42.16
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.40
  • 39.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa7 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000036337.

Cross-references

EnsemblENSDARG00000036337 (cers3b)
ZFINZDB-GENE-080220-32 (cers3b)
EMBLCU855696
Uniprot/SPTREMBLE9QGX3, E9QGX3_DANRE, F1QVG1, F1QVG1_DANRE

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