D. rerio Gene: cldn7a - ENSDARG00000036376 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036376
Namecldn7a
Descriptionclaudin 7a [Source:ZFIN;Acc:ZDB-GENE-040718-29]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92192
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.54e3
  • 1.54e3
94.83
  • 94.83
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.25e3
  • 2.25e3
92.48
  • 92.48
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
3.16e3
  • 3.16e3
  • 1.70e4
89.44
  • 89.44
  • 43.06
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
3.75e3
  • 3.75e3
  • 1.21e4
  • 1.88e4
  • 2.06e4
  • 2.25e4
87.43
  • 87.43
  • 59.51
  • 37.12
  • 31.05
  • 24.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.09e3
  • 5.09e3
  • 1.50e4
82.95
  • 82.95
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.98e3
  • 5.98e3
79.99
  • 79.99
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.19e3
  • 6.19e3
79.27
  • 79.27
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.03e3
  • 8.03e3
  • 1.07e4
73.12
  • 73.12
  • 64.28
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.14
  • 65.14
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.57
  • 64.57
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.93
  • 59.93
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.15
  • 59.15
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.16
  • 57.16
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.19
  • 49.19
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.04
  • 42.04
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.77
  • 39.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000036376.

Cross-references

EnsemblENSDARG00000036376 (cldn7a)
ZFINZDB-GENE-040718-29 (cldn7a)
EMBLBC075926, BC153583
Uniprot/SWISSPROTCLD7A_DANRE, Q6DHP1

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