D. rerio Gene: CU019646.1 - ENSDARG00000036414 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036414
NameCU019646.1
Description-
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.38
  • 94.38
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.64e3
  • 2.64e3
91.16
  • 91.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.78e3
  • 2.78e3
90.68
  • 90.68
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.82e3
  • 2.82e3
90.56
  • 90.56
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
89.69
  • 89.69
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.46e3
  • 3.46e3
  • 8.86e3
88.42
  • 88.42
  • 70.33
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
3.88e3
  • 3.88e3
  • 4.92e3
  • 8.64e3
  • 1.00e4
87.00
  • 87.00
  • 83.54
  • 71.08
  • 66.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.83e3
  • 4.83e3
83.83
  • 83.83
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.02
  • 82.02
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.57e3
  • 6.57e3
  • 9.64e3
78.02
  • 78.02
  • 67.72
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.59e3
  • 6.59e3
77.93
  • 77.93
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.42e3
  • 7.42e3
75.17
  • 75.17
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
8.15e3
  • 8.15e3
  • 9.90e3
  • 1.00e4
  • 1.07e4
  • 1.07e4
  • 1.13e4
  • 1.16e4
  • 1.20e4
  • 1.20e4
  • 1.24e4
72.73
  • 72.73
  • 66.85
  • 66.46
  • 64.20
  • 64.03
  • 62.13
  • 61.28
  • 59.89
  • 59.86
  • 58.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
8.81e3
  • 8.81e3
  • 9.07e3
  • 1.04e4
  • 1.05e4
  • 1.11e4
  • 1.15e4
  • 1.15e4
  • 1.17e4
  • 1.17e4
  • 1.18e4
70.50
  • 70.50
  • 69.63
  • 65.08
  • 64.69
  • 62.72
  • 61.62
  • 61.37
  • 60.87
  • 60.68
  • 60.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.04e3
  • 9.04e3
69.74
  • 69.74
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.04e3
  • 9.04e3
69.72
  • 69.72
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.86e3
  • 9.86e3
66.98
  • 66.98
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.87e3
  • 9.87e3
  • 1.11e4
  • 1.12e4
66.96
  • 66.96
  • 62.75
  • 62.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.03e4
  • 1.03e4
  • 1.23e4
65.50
  • 65.50
  • 58.95
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
  • 1.26e4
61.93
  • 61.93
  • 57.81
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.79
  • 58.79
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.24e4
  • 1.24e4
  • 1.46e4
58.40
  • 58.40
  • 51.02
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.06
  • 54.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.70
  • 42.70
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.76e4
  • 1.76e4
40.90
  • 40.90
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.63
  • 39.63
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000036414 (CU019646.1)
EMBLBX088704, BX322601, CU019646
Uniprot/SPTREMBLE7F0F4, E7F0F4_DANRE

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