D. rerio Gene: atp11c - ENSDARG00000036442 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036442
Nameatp11c
DescriptionATPase, Class VI, type 11C [Source:ZFIN;Acc:ZDB-GENE-030616-51]
OrganismDanio rerio (zebrafish)
Synonym(s)atp8b1, fb79h04, si:bz1l9.1, wu:fb79h04

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
94.59
  • 94.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.62e3
  • 2.62e3
91.24
  • 91.24
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
4.01e3
  • 4.01e3
  • 5.60e3
86.59
  • 86.59
  • 81.24
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.23e3
  • 4.23e3
85.83
  • 85.83
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
84.86
  • 84.86
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.61e3
  • 4.61e3
84.55
  • 84.55
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.20e3
  • 5.20e3
82.60
  • 82.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.22e3
  • 5.22e3
82.51
  • 82.51
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.66e3
  • 5.66e3
  • 5.97e3
81.04
  • 81.04
  • 80.00
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.84e3
  • 5.84e3
80.45
  • 80.45
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.07e3
  • 6.07e3
  • 8.74e3
79.67
  • 79.67
  • 70.73
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
79.63
  • 79.63
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.14e3
  • 6.14e3
79.44
  • 79.44
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.61e3
  • 6.61e3
77.88
  • 77.88
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.80
  • 77.80
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.89e3
  • 6.89e3
76.95
  • 76.95
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.37e3
  • 8.37e3
71.99
  • 71.99
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.69e3
  • 8.69e3
70.92
  • 70.92
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.71e3
  • 8.71e3
70.84
  • 70.84
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.84e3
  • 8.84e3
70.41
  • 70.41
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
8.93e3
  • 8.93e3
  • 9.96e3
  • 1.05e4
  • 1.07e4
  • 1.13e4
70.10
  • 70.10
  • 66.66
  • 64.83
  • 64.02
  • 62.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.27e3
  • 9.27e3
68.95
  • 68.95
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.43e3
  • 9.43e3
  • 1.07e4
68.43
  • 68.43
  • 64.25
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
9.84e3
  • 9.84e3
  • 1.00e4
67.05
  • 67.05
  • 66.45
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.87
  • 65.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000036442 (atp11c)
Uniprot/SPTREMBLE7F9A5, E7F9A5_DANRE
ZFINZDB-GENE-030616-51 (atp11c)

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