D. rerio Gene: cldn15a - ENSDARG00000036463 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036463
Namecldn15a
Descriptionclaudin 15a [Source:ZFIN;Acc:ZDB-GENE-040426-1305]
OrganismDanio rerio (zebrafish)
Synonym(s)cldn15, cldn15l, cldn15lgn, zgc:63943
Orthologs(s)14 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
773
  • 773
  • 8.96e3
  • 1.24e4
  • 1.49e4
97.41
  • 97.41
  • 70.00
  • 58.33
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.90e3
  • 2.90e3
  • 1.15e4
90.29
  • 90.29
  • 61.56
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.50e3
  • 6.50e3
78.24
  • 78.24
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
7.46e3
  • 7.46e3
  • 1.11e4
  • 1.15e4
  • 1.19e4
  • 1.83e4
75.01
  • 75.01
  • 62.98
  • 61.62
  • 60.03
  • 38.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.83e3
  • 8.83e3
70.43
  • 70.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.39
  • 66.39
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.10
  • 64.10
AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000028Segmentation:26+ somites
1.12e4
  • 1.12e4
  • 1.19e4
  • 1.49e4
  • 1.49e4
62.50
  • 62.50
  • 60.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000925endoderm
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
1.12e4
  • 1.12e4
  • 1.15e4
  • 1.17e4
  • 1.28e4
  • 1.31e4
  • 1.49e4
  • 1.49e4
62.49
  • 62.49
  • 61.53
  • 60.70
  • 57.14
  • 56.24
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
  • 1.15e4
  • 1.17e4
  • 1.17e4
  • 1.50e4
62.48
  • 62.48
  • 61.53
  • 60.70
  • 60.70
  • 49.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.14e4
  • 1.20e4
  • 1.20e4
  • 1.21e4
  • 1.25e4
  • 1.26e4
62.48
  • 62.48
  • 62.48
  • 61.75
  • 59.98
  • 59.98
  • 59.36
  • 58.31
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.14e4
  • 1.14e4
  • 1.25e4
  • 1.27e4
61.88
  • 61.88
  • 58.31
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
1.20e4
  • 1.20e4
  • 1.49e4
59.98
  • 59.98
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000035Larval:Protruding-mouth
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0003081lateral plate mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.33e4
  • 1.33e4
55.55
  • 55.55
AEIR
  • AEIR
UBERON:0005721pronephric mesoderm
  • ZFS:0000024Segmentation:5-9 somites
1.33e4
  • 1.33e4
55.55
  • 55.55
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.21
  • 52.21
AEIR
  • AEIR
UBERON:0002108small intestine
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • ZFS:0000032Pharyngula:High-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0009622pronephric proximal straight tubule
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.51e4
  • 1.51e4
49.32
  • 49.32
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.74
  • 46.74
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.74e4
  • 1.74e4
41.77
  • 41.77
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.77e4
  • 1.77e4
40.60
  • 40.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.28
  • 39.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
36.95
  • 36.95
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
  • 2.10e4
33.77
  • 33.77
  • 29.85
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.39e4
  • 2.39e4
20.05
  • 20.05
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.47e4
  • 2.47e4
17.16
  • 17.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000036463.

Cross-references

EnsemblENSDARG00000036463 (cldn15a)
ZFINZDB-GENE-040426-1305 (cldn15a)
EMBLBC054577, BC153629, BX927371
Uniprot/SPTREMBLQ7T2E7, Q7T2E7_DANRE

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