D. rerio Gene: mhc1zba - ENSDARG00000036588 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036588
Namemhc1zba
Descriptionmajor histocompatibility complex class I ZBA [Source:ZFIN;Acc:ZDB-GENE-040426-2149]
OrganismDanio rerio (zebrafish)
Synonym(s)hlazel, zgc:64115
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
160
  • 160
99.47
  • 99.47
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
190
  • 190
99.37
  • 99.37
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
197
  • 197
99.34
  • 99.34
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
220
  • 220
99.27
  • 99.27
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
221
  • 221
99.26
  • 99.26
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
222
  • 222
99.26
  • 99.26
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
235
  • 235
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
337
  • 337
  • 9.35e3
98.87
  • 98.87
  • 68.68
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
465
  • 465
98.45
  • 98.45
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
549
  • 549
  • 5.12e3
98.16
  • 98.16
  • 82.85
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
551
  • 551
98.16
  • 98.16
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
560
  • 560
  • 3.32e3
98.13
  • 98.13
  • 88.89
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
567
  • 567
98.11
  • 98.11
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
574
  • 574
98.08
  • 98.08
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
660
  • 660
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
970
  • 970
96.76
  • 96.76
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.39e3
  • 1.39e3
  • 1.45e4
95.36
  • 95.36
  • 51.44
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
2.71e3
  • 2.71e3
  • 7.21e3
  • 7.88e3
  • 8.97e3
  • 9.42e3
  • 1.00e4
  • 1.22e4
  • 1.23e4
  • 1.24e4
  • 1.50e4
90.92
  • 90.92
  • 75.86
  • 73.62
  • 69.96
  • 68.45
  • 66.45
  • 59.11
  • 58.87
  • 58.59
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000104life cycle
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000036Larval:Day 4
5.25e3
  • 5.25e3
  • 6.03e3
  • 7.56e3
  • 1.36e4
  • 1.39e4
  • 1.45e4
  • 1.46e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
  • 1.50e4
  • 1.54e4
82.42
  • 82.42
  • 79.81
  • 74.69
  • 54.48
  • 53.34
  • 51.40
  • 51.16
  • 50.61
  • 50.58
  • 50.46
  • 50.34
  • 50.32
  • 50.27
  • 50.01
  • 49.92
  • 49.67
  • 48.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
5.77e3
  • 5.77e3
  • 6.28e3
  • 1.01e4
80.70
  • 80.70
  • 78.97
  • 66.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.87e3
  • 6.87e3
77.01
  • 77.01
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
8.56e3
  • 8.56e3
  • 1.00e4
  • 1.01e4
  • 1.02e4
  • 1.15e4
  • 1.43e4
71.35
  • 71.35
  • 66.42
  • 66.22
  • 65.92
  • 61.62
  • 52.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.85e3
  • 8.85e3
70.36
  • 70.36
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.43e3
  • 9.43e3
68.42
  • 68.42
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.66e3
  • 9.66e3
67.65
  • 67.65
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.04e4
  • 1.04e4
  • 1.31e4
  • 1.33e4
65.23
  • 65.23
  • 56.04
  • 55.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
1.10e4
  • 1.10e4
  • 1.19e4
  • 1.31e4
63.24
  • 63.24
  • 60.28
  • 56.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.22e4
  • 1.22e4
59.03
  • 59.03
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
56.16
  • 56.16
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.33e4
  • 1.33e4
55.56
  • 55.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi5 genesCompare expression
Clupeocephala6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000036588.

Cross-references

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