D. rerio Gene: rcbtb1 - ENSDARG00000036645 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036645
Namercbtb1
Descriptionregulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
OrganismDanio rerio (zebrafish)
Synonym(s)fj43a07, wu:fj43a07, zgc:56037

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.02e3
  • 1.02e3
96.60
  • 96.60
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
1.95e3
  • 1.95e3
  • 7.05e3
  • 7.92e3
  • 9.71e3
93.48
  • 93.48
  • 76.38
  • 73.47
  • 67.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.41e3
  • 2.41e3
91.93
  • 91.93
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.70e3
  • 2.70e3
  • 9.70e3
  • 1.02e4
  • 1.08e4
  • 1.12e4
  • 1.12e4
  • 1.12e4
  • 1.15e4
  • 1.17e4
  • 1.17e4
  • 1.20e4
  • 1.21e4
  • 1.26e4
  • 1.28e4
  • 1.47e4
  • 1.50e4
90.96
  • 90.96
  • 67.51
  • 65.97
  • 63.91
  • 62.65
  • 62.59
  • 62.45
  • 61.62
  • 60.81
  • 60.70
  • 59.85
  • 59.45
  • 57.93
  • 57.11
  • 50.68
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
3.02e3
  • 3.02e3
  • 3.94e3
  • 6.85e3
  • 9.90e3
  • 9.93e3
89.88
  • 89.88
  • 86.82
  • 77.08
  • 66.87
  • 66.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.29e3
  • 3.29e3
88.98
  • 88.98
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.92e3
  • 3.92e3
86.87
  • 86.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
81.30
  • 81.30
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.00e3
  • 6.00e3
79.92
  • 79.92
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.11e3
  • 6.11e3
79.53
  • 79.53
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.26
  • 77.26
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.95e3
  • 6.95e3
  • 1.23e4
76.73
  • 76.73
  • 58.85
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.34e3
  • 7.34e3
75.43
  • 75.43
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
7.81e3
  • 7.81e3
  • 9.44e3
73.84
  • 73.84
  • 68.38
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.68e3
  • 8.68e3
  • 8.95e3
70.94
  • 70.94
  • 70.03
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.00e3
  • 9.00e3
69.86
  • 69.86
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.05e3
  • 9.05e3
69.70
  • 69.70
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.17e3
  • 9.17e3
69.30
  • 69.30
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.26e3
  • 9.26e3
69.01
  • 69.01
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.27e3
  • 9.27e3
68.96
  • 68.96
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.35e3
  • 9.35e3
68.69
  • 68.69
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.39e3
  • 9.39e3
68.54
  • 68.54
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
9.75e3
  • 9.75e3
  • 1.00e4
  • 1.11e4
  • 1.12e4
  • 1.15e4
  • 1.17e4
  • 1.22e4
  • 1.26e4
  • 1.28e4
  • 1.39e4
67.36
  • 67.36
  • 66.53
  • 62.90
  • 62.58
  • 61.52
  • 60.82
  • 59.16
  • 57.77
  • 57.23
  • 53.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.77e3
  • 9.77e3
67.30
  • 67.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.86e3
  • 9.86e3
  • 1.05e4
  • 1.11e4
  • 1.11e4
  • 1.12e4
  • 1.21e4
66.99
  • 66.99
  • 64.69
  • 62.88
  • 62.67
  • 62.67
  • 59.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.69
  • 65.69
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.61
  • 64.61
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.50
  • 64.50
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.13e4
  • 1.13e4
62.15
  • 62.15
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.16e4
  • 1.16e4
  • 1.17e4
  • 1.19e4
61.27
  • 61.27
  • 60.91
  • 60.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.12
  • 60.12
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.36
  • 55.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX294379
EnsemblENSDARG00000036645 (rcbtb1)
Uniprot/SPTREMBLB8A4R1, B8A4R1_DANRE, F8W2K5, F8W2K5_DANRE
ZFINZDB-GENE-030131-7951 (rcbtb1)

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