Gene: nitr7a - ENSDARG00000036743 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000036743
Name	nitr7a
Description	novel immune-type receptor 7a [Source:ZFIN;Acc:ZDB-GENE-041001-9]
Organism	Danio rerio (zebrafish)
Synonym(s)	nitr7.2, nitr7.3, nitr7.7, nitr7.9, nitr7a_1
Paralog(s)	4 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.60e4 1.60e4	46.57 46.57	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.72e4 1.72e4	42.46 42.46	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.85e4 1.85e4	38.20 38.20	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.89e4 1.89e4	36.74 36.74	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	2.15e4 2.15e4	27.99 27.99	AEIR AEIR
UBERON:0004734	gastrula	[+] 1 stage ZFS:0000019Gastrula:Shield	2.33e4 2.33e4	21.87 21.87	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	2.37e4 2.37e4	20.67 20.67	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	2.43e4 2.43e4	18.69 18.69	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.63e4 2.63e4	12.05 12.05	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	4 genes ENSDARG00000067977 nitr7b ENSDARG00000087920 nitr10a ENSDARG00000100389 nitr11a ENSDARG00000103653 si:ch73-266m14.1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000036743.

Cross-references

Ensembl	ENSDARG00000036743 (nitr7a)
ZFIN	ZDB-GENE-041001-9 (nitr7a)
EMBL	AL591406
Uniprot/SPTREMBL	Q5VTP5, Q5VTP5_DANRE, Q5YB50, Q5YB50_DANRE