Gene: URGCP (1 to many) - ENSDARG00000036767 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000036767
Name	URGCP (1 to many)
Description	si:dkey-204a24.10 [Source:ZFIN;Acc:ZDB-GENE-120215-160]
Organism	Danio rerio (zebrafish)
Synonym(s)	dkfzp666g166, dkfzp686o0457, flj20654, kiaa1507, urg4
Orthologs(s)	4 orthologs
Paralog(s)	2 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	7.78e3 7.78e3	73.95 73.95	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	2.03e4 2.03e4	32.02 32.02	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.09e4 2.09e4	29.86 29.86	AEIR AEIR
UBERON:0000922	embryo	[+] 1 stage ZFS:0000037Larval:Day 5	2.12e4 2.12e4	29.17 29.17	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	2.14e4 2.14e4	28.49 28.49	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	2.24e4 2.24e4 2.66e4	25.15 25.15 10.95	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	1 species Xenopus tropicalis (western clawed frog)	4 genes ENSXETG00000001968 ENSXETG00000012292 ENSXETG00000031624 ENSXETG00000032995	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000036767.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Euteleostomi	2 genes ENSDARG00000058685 URGCP (1 to many) ENSDARG00000078731 URGCP (1 to many)	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000036767.

Cross-references

Ensembl	ENSDARG00000036767 (URGCP (1 to many))
HGNC	HGNC:30890 (URGCP (1 to many))
ZFIN	ZDB-GENE-120215-160 (si:dkey-204a24.10)
EMBL	CR628394
Uniprot/SPTREMBL	E7F219, E7F219_DANRE