D. rerio Gene: aldh8a1 - ENSDARG00000036776 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036776
Namealdh8a1
Descriptionaldehyde dehydrogenase 8 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040912-3]
OrganismDanio rerio (zebrafish)
Synonym(s)fi34g05, raldh4, wu:fi34g05, zgc:92068

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.54e3
  • 1.54e3
  • 1.12e4
  • 1.28e4
94.86
  • 94.86
  • 62.48
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.63e3
  • 1.63e3
94.56
  • 94.56
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.81e3
  • 1.81e3
  • 1.24e4
93.96
  • 93.96
  • 58.33
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.22e3
  • 2.22e3
92.56
  • 92.56
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
4.47e3
  • 4.47e3
  • 4.74e3
  • 5.62e3
85.02
  • 85.02
  • 84.12
  • 81.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000066fully formed stage
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000104life cycle
4.86e3
  • 4.86e3
  • 5.36e3
  • 5.41e3
  • 5.69e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 7.97e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.24e3
  • 8.71e3
  • 8.71e3
  • 8.79e3
  • 8.83e3
  • 8.99e3
  • 9.96e3
  • 9.96e3
  • 1.01e4
  • 1.05e4
  • 1.09e4
  • 1.13e4
  • 1.16e4
  • 1.17e4
  • 1.17e4
  • 1.21e4
  • 1.22e4
  • 1.50e4
83.72
  • 83.72
  • 82.07
  • 81.89
  • 80.95
  • 74.99
  • 74.99
  • 73.52
  • 73.32
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.43
  • 70.82
  • 70.82
  • 70.57
  • 70.44
  • 69.90
  • 66.65
  • 66.65
  • 66.22
  • 64.72
  • 63.51
  • 62.13
  • 61.03
  • 60.95
  • 60.74
  • 59.41
  • 59.11
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.35e3
  • 5.35e3
82.09
  • 82.09
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
6.92e3
  • 6.92e3
  • 7.02e3
  • 7.21e3
  • 8.06e3
  • 8.07e3
  • 8.83e3
  • 9.40e3
  • 1.06e4
  • 1.07e4
  • 1.16e4
76.82
  • 76.82
  • 76.48
  • 75.86
  • 73.02
  • 72.98
  • 70.42
  • 68.52
  • 64.60
  • 64.17
  • 61.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000033Hatching:Long-pec
8.96e3
  • 8.96e3
69.99
  • 69.99
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.17e3
  • 9.17e3
69.29
  • 69.29
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.23e3
  • 9.23e3
69.09
  • 69.09
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.67e3
  • 9.67e3
67.62
  • 67.62
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
  • 1.48e4
65.84
  • 65.84
  • 50.48
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.02e4
  • 1.02e4
65.75
  • 65.75
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.05e4
  • 1.05e4
  • 1.09e4
  • 1.11e4
64.98
  • 64.98
  • 63.50
  • 62.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.05e4
  • 1.05e4
  • 1.24e4
  • 1.28e4
64.74
  • 64.74
  • 58.61
  • 57.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.15e4
  • 1.15e4
61.36
  • 61.36
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.24
  • 59.24
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.11
  • 59.11
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.90
  • 55.90
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
  • 1.85e4
51.84
  • 51.84
  • 38.10
AEIR
  • AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000039Larval:Days 7-13
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2005126intestinal bulb epithelium
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.51e4
  • 1.51e4
  • 1.85e4
49.30
  • 49.30
  • 38.16
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.37
  • 41.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.32
  • 40.32
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
  • 1.93e4
36.48
  • 36.48
  • 35.45
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.01
  • 30.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC081581, BC152164, BX927365, EU155019
EnsemblENSDARG00000036776 (aldh8a1)
Uniprot/SPTREMBLA9YD19, A9YD19_DANRE
Uniprot/SWISSPROTAL8A1_DANRE, Q66I21
ZFINZDB-GENE-040912-3 (aldh8a1)

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