D. rerio Gene: commd7 - ENSDARG00000036784 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036784
Namecommd7
DescriptionCOMM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040801-96]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:101056

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.45e3
  • 1.45e3
95.14
  • 95.14
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.10e3
  • 2.10e3
92.96
  • 92.96
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.42
  • 91.42
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.68e3
  • 2.68e3
91.03
  • 91.03
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
3.06e3
  • 3.06e3
  • 3.94e3
  • 5.70e3
  • 6.13e3
  • 6.19e3
  • 9.25e3
89.77
  • 89.77
  • 86.81
  • 80.91
  • 79.48
  • 79.29
  • 69.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
  • 5.23e3
89.70
  • 89.70
  • 82.47
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.11e3
  • 3.11e3
89.58
  • 89.58
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.39e3
  • 3.39e3
  • 5.08e3
88.66
  • 88.66
  • 82.98
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.73e3
  • 3.73e3
87.51
  • 87.51
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
4.07e3
  • 4.07e3
  • 4.89e3
  • 4.90e3
  • 5.02e3
  • 6.32e3
  • 8.34e3
  • 8.44e3
  • 8.74e3
  • 9.59e3
  • 1.10e4
86.38
  • 86.38
  • 83.65
  • 83.60
  • 83.21
  • 78.83
  • 72.07
  • 71.75
  • 70.74
  • 67.89
  • 63.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.28e3
  • 4.28e3
85.68
  • 85.68
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.33e3
  • 4.33e3
85.50
  • 85.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
85.47
  • 85.47
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.44e3
  • 4.44e3
85.15
  • 85.15
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.44e3
  • 4.44e3
85.14
  • 85.14
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
83.99
  • 83.99
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
4.83e3
  • 4.83e3
  • 4.95e3
  • 8.64e3
  • 8.91e3
  • 1.03e4
83.83
  • 83.83
  • 83.41
  • 71.08
  • 70.16
  • 65.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.87e3
  • 4.87e3
  • 7.37e3
  • 9.98e3
83.69
  • 83.69
  • 75.32
  • 66.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.09e3
  • 5.09e3
82.96
  • 82.96
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.10e3
  • 5.10e3
  • 7.01e3
82.93
  • 82.93
  • 76.53
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.46e3
  • 5.46e3
  • 8.85e3
81.71
  • 81.71
  • 70.38
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
81.50
  • 81.50
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.91e3
  • 5.91e3
80.22
  • 80.22
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.04e3
  • 7.04e3
76.42
  • 76.42
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
7.11e3
  • 7.11e3
  • 7.62e3
  • 7.90e3
  • 7.99e3
  • 8.02e3
  • 8.82e3
  • 8.91e3
  • 9.44e3
  • 9.56e3
  • 9.62e3
  • 1.01e4
  • 1.05e4
  • 1.13e4
  • 1.26e4
  • 1.48e4
  • 1.50e4
  • 1.50e4
76.20
  • 76.20
  • 74.48
  • 73.56
  • 73.26
  • 73.14
  • 70.46
  • 70.17
  • 68.40
  • 67.99
  • 67.78
  • 66.15
  • 64.86
  • 62.12
  • 57.80
  • 50.61
  • 49.92
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.52e3
  • 7.52e3
74.81
  • 74.81
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
7.54e3
  • 7.54e3
  • 8.65e3
  • 9.41e3
  • 1.07e4
74.76
  • 74.76
  • 71.03
  • 68.48
  • 64.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.57e3
  • 7.57e3
74.64
  • 74.64
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.21e3
  • 8.21e3
72.50
  • 72.50
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.39e3
  • 9.39e3
68.55
  • 68.55
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.46e3
  • 9.46e3
68.34
  • 68.34
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.04e4
  • 1.04e4
65.05
  • 65.05
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.13e4
  • 1.13e4
62.16
  • 62.16
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.32e4
  • 1.32e4
55.82
  • 55.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX927275
EnsemblENSDARG00000036784 (commd7)
Uniprot/SPTREMBLF1QJA8, F1QJA8_DANRE
ZFINZDB-GENE-040801-96 (commd7)

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