D. rerio Gene: ifrd2 - ENSDARG00000036811 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036811
Nameifrd2
Descriptioninterferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
OrganismDanio rerio (zebrafish)
Synonym(s)fb94c05, fc05c10, sb:cb936, wu:fb94c05, wu:fc05c10, zgc:100956

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
924
  • 924
  • 1.34e4
  • 1.34e4
  • 1.34e4
  • 1.37e4
96.91
  • 96.91
  • 55.13
  • 54.97
  • 54.97
  • 54.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
1.44e3
  • 1.44e3
  • 1.35e4
  • 1.36e4
95.17
  • 95.17
  • 54.73
  • 54.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000109gastrula stage
  • ZFS:0000049segmentation
1.55e3
  • 1.55e3
  • 1.72e3
  • 1.92e3
  • 1.92e3
  • 1.97e3
  • 2.07e3
  • 2.59e3
  • 2.85e3
  • 3.36e3
  • 3.69e3
  • 3.93e3
  • 4.27e3
  • 5.76e3
  • 6.39e3
  • 6.42e3
  • 1.38e4
  • 1.41e4
  • 1.49e4
  • 1.49e4
94.80
  • 94.80
  • 94.26
  • 93.57
  • 93.56
  • 93.42
  • 93.08
  • 91.34
  • 90.45
  • 88.75
  • 87.64
  • 86.83
  • 85.71
  • 80.71
  • 78.60
  • 78.49
  • 53.84
  • 52.86
  • 49.99
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.73e3
  • 1.73e3
  • 1.75e3
  • 1.86e3
  • 1.96e3
  • 2.07e3
  • 2.55e3
  • 2.59e3
  • 2.66e3
  • 3.22e3
  • 4.43e3
94.20
  • 94.20
  • 94.14
  • 93.77
  • 93.44
  • 93.06
  • 91.45
  • 91.32
  • 91.09
  • 89.23
  • 85.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.80e3
  • 1.80e3
93.99
  • 93.99
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
2.00e3
  • 2.00e3
  • 2.25e3
  • 2.38e3
  • 3.54e3
  • 5.86e3
  • 5.86e3
93.29
  • 93.29
  • 92.46
  • 92.03
  • 88.14
  • 80.39
  • 80.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
2.04e3
  • 2.04e3
  • 3.64e3
  • 5.60e3
  • 6.71e3
  • 6.92e3
93.18
  • 93.18
  • 87.83
  • 81.25
  • 77.54
  • 76.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.08e3
  • 2.08e3
93.05
  • 93.05
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.21e3
  • 2.21e3
  • 2.90e3
  • 3.75e3
  • 7.07e3
92.60
  • 92.60
  • 90.30
  • 87.46
  • 76.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.22e3
  • 2.22e3
  • 3.58e3
92.57
  • 92.57
  • 88.03
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.27e3
  • 2.27e3
  • 4.94e3
92.39
  • 92.39
  • 83.45
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.91e3
  • 2.91e3
90.27
  • 90.27
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
  • 6.57e3
89.45
  • 89.45
  • 78.02
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
3.65e3
  • 3.65e3
  • 4.02e3
  • 4.64e3
87.78
  • 87.78
  • 86.53
  • 84.47
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.75e3
  • 3.75e3
87.43
  • 87.43
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.87e3
  • 3.87e3
87.06
  • 87.06
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.81
  • 86.81
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
86.72
  • 86.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
4.17e3
  • 4.17e3
  • 1.40e4
  • 1.42e4
86.05
  • 86.05
  • 53.10
  • 52.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.33e3
  • 4.33e3
85.50
  • 85.50
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.48e3
  • 4.48e3
85.00
  • 85.00
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.50e3
  • 4.50e3
84.95
  • 84.95
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.51e3
  • 4.51e3
84.91
  • 84.91
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.62e3
  • 4.62e3
84.54
  • 84.54
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.86e3
  • 4.86e3
83.74
  • 83.74
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.29e3
  • 5.29e3
  • 6.52e3
82.30
  • 82.30
  • 78.18
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.92e3
  • 5.92e3
80.18
  • 80.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.22e3
  • 6.22e3
79.18
  • 79.18
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.40e3
  • 6.40e3
78.59
  • 78.59
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.38e3
  • 7.38e3
75.29
  • 75.29
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
8.04e3
  • 8.04e3
  • 9.25e3
  • 9.67e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
73.07
  • 73.07
  • 69.03
  • 67.63
  • 67.48
  • 66.65
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.05e3
  • 8.05e3
73.04
  • 73.04
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.81e3
  • 8.81e3
70.50
  • 70.50
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.12e3
  • 9.12e3
69.47
  • 69.47
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.39e4
  • 1.39e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
53.31
  • 53.31
  • 49.98
  • 49.98
  • 49.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.40e4
  • 1.40e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
53.10
  • 53.10
  • 49.98
  • 49.98
  • 49.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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