D. rerio Gene: rps12 - ENSDARG00000036875 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036875
Namerps12
Descriptionribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
OrganismDanio rerio (zebrafish)
Synonym(s)fa95a02, wu:fa95a02, zgc:73055
Orthologs(s)35 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
24.7
  • 24.7
99.92
  • 99.92
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
26.0
  • 26.0
99.92
  • 99.92
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
26.2
  • 26.2
  • 26.3
  • 34.5
  • 42.0
  • 57.1
  • 74.7
  • 79.0
  • 89.8
  • 96.1
  • 126
99.92
  • 99.92
  • 99.92
  • 99.89
  • 99.86
  • 99.81
  • 99.75
  • 99.74
  • 99.70
  • 99.68
  • 99.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
26.9
  • 26.9
  • 32.2
  • 36.5
  • 40.9
  • 49.3
  • 55.9
  • 59.2
  • 68.9
  • 75.4
  • 81.8
  • 87.2
  • 89.2
  • 90.5
  • 274
99.91
  • 99.91
  • 99.90
  • 99.88
  • 99.87
  • 99.84
  • 99.82
  • 99.81
  • 99.77
  • 99.75
  • 99.73
  • 99.71
  • 99.70
  • 99.70
  • 99.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
29.0
  • 29.0
99.91
  • 99.91
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
29.7
  • 29.7
99.90
  • 99.90
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
32.0
  • 32.0
99.90
  • 99.90
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
33.4
  • 33.4
99.89
  • 99.89
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
33.8
  • 33.8
99.89
  • 99.89
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
35.0
  • 35.0
99.89
  • 99.89
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
35.9
  • 35.9
99.88
  • 99.88
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
37.4
  • 37.4
99.88
  • 99.88
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
49.0
  • 49.0
99.84
  • 99.84
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
50.2
  • 50.2
  • 83.8
  • 344
  • 1.02e3
99.84
  • 99.84
  • 99.72
  • 98.85
  • 96.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
53.8
  • 53.8
  • 58.2
  • 87.8
  • 92.7
  • 109
  • 140
99.82
  • 99.82
  • 99.81
  • 99.71
  • 99.69
  • 99.64
  • 99.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
57.9
  • 57.9
  • 106
  • 127
99.81
  • 99.81
  • 99.65
  • 99.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
64.0
  • 64.0
99.79
  • 99.79
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
67.3
  • 67.3
  • 1.31e3
99.78
  • 99.78
  • 95.62
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
69.2
  • 69.2
  • 137
99.77
  • 99.77
  • 99.54
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
73.5
  • 73.5
  • 1.07e3
99.76
  • 99.76
  • 96.42
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
75.0
  • 75.0
99.75
  • 99.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
76.2
  • 76.2
99.75
  • 99.75
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
77.0
  • 77.0
99.75
  • 99.75
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
82.1
  • 82.1
99.73
  • 99.73
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
85.1
  • 85.1
99.72
  • 99.72
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
91.9
  • 91.9
  • 97.6
99.70
  • 99.70
  • 99.68
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
102
  • 102
99.66
  • 99.66
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
127
  • 127
  • 131
  • 172
  • 184
  • 277
99.58
  • 99.58
  • 99.56
  • 99.43
  • 99.39
  • 99.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
218
  • 218
99.27
  • 99.27
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.79e3
  • 1.79e3
93.99
  • 93.99
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.65e3
  • 4.65e3
84.42
  • 84.42
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.82
  • 50.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species28 genesCompare expression
Bilateria26 species35 genesCompare expression

Orthology information comes from OMA : ENSDARG00000036875.

Cross-references

EnsemblENSDARG00000036875 (rps12)
ZFINZDB-GENE-030131-8951 (rps12)
EMBLAY561510, BC059433, CR759830
Uniprot/SPTREMBLQ6PC90, Q6PC90_DANRE

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