D. rerio Gene: f13a1b - ENSDARG00000036893 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036893
Namef13a1b
Descriptioncoagulation factor XIII, A1 polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-9634]
OrganismDanio rerio (zebrafish)
Synonym(s)f13a1, fo83d04, fx111a-87, wu:fo83d04, zgc:153334

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.20e3
  • 1.20e3
95.99
  • 95.99
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.42e3
  • 1.42e3
95.24
  • 95.24
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.02e3
  • 3.02e3
89.90
  • 89.90
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.10e3
  • 3.10e3
  • 5.79e3
89.61
  • 89.61
  • 80.60
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.18e3
  • 3.18e3
89.36
  • 89.36
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.52e3
  • 3.52e3
  • 1.71e4
88.23
  • 88.23
  • 42.58
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.73e3
  • 3.73e3
87.52
  • 87.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.74e3
  • 3.74e3
87.48
  • 87.48
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.94e3
  • 3.94e3
  • 5.08e3
  • 5.57e3
  • 6.84e3
  • 7.67e3
  • 8.90e3
  • 9.88e3
  • 1.18e4
  • 1.27e4
  • 1.41e4
86.80
  • 86.80
  • 82.99
  • 81.36
  • 77.08
  • 74.31
  • 70.19
  • 66.93
  • 60.65
  • 57.36
  • 52.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.02e3
  • 4.02e3
86.53
  • 86.53
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.19e3
  • 4.19e3
  • 6.65e3
  • 8.01e3
  • 8.18e3
  • 9.28e3
  • 1.00e4
  • 1.04e4
  • 1.05e4
  • 1.16e4
  • 1.16e4
  • 1.17e4
  • 1.22e4
  • 1.22e4
  • 1.28e4
  • 1.42e4
  • 1.47e4
85.98
  • 85.98
  • 77.74
  • 73.19
  • 72.62
  • 68.91
  • 66.53
  • 65.11
  • 64.98
  • 61.23
  • 61.18
  • 60.95
  • 59.07
  • 59.03
  • 57.02
  • 52.43
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.07e3
  • 5.07e3
83.01
  • 83.01
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.33e3
  • 5.33e3
  • 6.56e3
82.15
  • 82.15
  • 78.03
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.82e3
  • 5.82e3
80.51
  • 80.51
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
6.26e3
  • 6.26e3
  • 6.91e3
  • 9.68e3
  • 1.04e4
  • 1.06e4
  • 1.11e4
79.05
  • 79.05
  • 76.86
  • 67.60
  • 65.15
  • 64.50
  • 62.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.45e3
  • 6.45e3
  • 1.50e4
78.41
  • 78.41
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.67e3
  • 6.67e3
77.67
  • 77.67
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
6.86e3
  • 6.86e3
  • 8.27e3
  • 8.44e3
77.02
  • 77.02
  • 72.33
  • 71.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.05
  • 76.05
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
7.68e3
  • 7.68e3
  • 7.92e3
  • 1.06e4
  • 1.28e4
74.28
  • 74.28
  • 73.48
  • 64.54
  • 57.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
8.10e3
  • 8.10e3
  • 1.01e4
  • 1.11e4
72.88
  • 72.88
  • 66.24
  • 62.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.12e3
  • 8.12e3
72.82
  • 72.82
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.45e3
  • 8.45e3
71.70
  • 71.70
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.42e3
  • 9.42e3
  • 1.80e4
68.47
  • 68.47
  • 39.66
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.81e3
  • 9.81e3
67.16
  • 67.16
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.10
  • 63.10
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.12e4
  • 1.12e4
62.61
  • 62.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.17
  • 62.17
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.20e4
  • 1.20e4
59.97
  • 59.97
AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000034Hatching:Pec-fin
1.21e4
  • 1.21e4
  • 1.49e4
59.36
  • 59.36
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.71
  • 50.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX004828, CR382283
EnsemblENSDARG00000036893 (f13a1b)
Uniprot/SPTREMBLF1R1R7, F1R1R7_DANRE
ZFINZDB-GENE-030131-9634 (f13a1b)

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