Gene: dap1b - ENSDARG00000036895 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000036895
Name	dap1b
Description	death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
Organism	Danio rerio (zebrafish)
Synonym(s)	cb369, hm:zeh0189, zgc:136540
Orthologs(s)	17 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	315 315	98.95 98.95	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	364 364	98.78 98.78	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	415 415	98.61 98.61	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	423 423	98.59 98.59	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	460 460	98.46 98.46	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	488 488	98.37 98.37	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	532 532 1.58e3	98.22 98.22 94.70	AEIR AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	566 566 1.25e3	98.11 98.11 95.83	AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	567 567 780	98.10 98.10 97.39	AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	582 582 749	98.05 98.05 97.50	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	655 655	97.81 97.81	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	734 734	97.55 97.55	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000033Hatching:Long-pec	748 748 1.27e3 1.75e3 2.03e3 2.48e3	97.50 97.50 95.74 94.15 93.21 91.70	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	873 873	97.08 97.08	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	878 878 1.06e3	97.06 97.06 96.47	AEIR AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	904 904	96.98 96.98	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	986 986	96.70 96.70	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.00e3 1.00e3	96.64 96.64	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.11e3 1.11e3	96.29 96.29	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.28e3 1.28e3	95.71 95.71	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.71e3 1.71e3	94.29 94.29	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	2.05e3 2.05e3	93.13 93.13	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	2.24e3 2.24e3	92.49 92.49	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	2.65e3 2.65e3	91.14 91.14	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	4.48e3 4.48e3	84.99 84.99	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	4.60e3 4.60e3	84.59 84.59	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000163331 DAPL1 ENSMUSG00000026989 Dapl1 ENSPTRG00000012560 DAPL1 ENSGGOG00000002893 DAPL1 ENSMMUG00000022389 DAPL1 ENSRNOG00000005743 Dapl1 ENSBTAG00000032481 DAPL1 ENSSSCG00000015879 DAPL1 ENSECAG00000015671 DAPL1 ENSOCUG00000008620 DAPL1 ENSCAFG00000009366 DAPL1 ENSFCAG00000015403 DAPL1 ENSCPOG00000026484 DAPL1 ENSMODG00000004485 DAPL1 ENSOANG00000006142 DAPL1 ENSGALG00000012564 ENSXETG00000027492 dapl1	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000036895.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	1 gene ENSDARG00000086842 dap1b	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000036895.

Cross-references

Ensembl	ENSDARG00000036895 (dap1b)
ZFIN	ZDB-GENE-000511-4 (dap1b)
EMBL	AF231128, BC115168
Uniprot/SPTREMBL	F1QEQ3, F1QEQ3_DANRE, Q9I9N0, Q9I9N0_DANRE