D. rerio Gene: arf3b - ENSDARG00000036998 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000036998
Namearf3b
DescriptionADP-ribosylation factor 3b [Source:ZFIN;Acc:ZDB-GENE-030616-356]
OrganismDanio rerio (zebrafish)
Synonym(s)arf1, arf3, si:dz202l16.1
Paralog(s)31 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.94e3
  • 1.94e3
  • 8.50e3
  • 1.37e4
  • 1.57e4
  • 1.64e4
93.50
  • 93.50
  • 71.55
  • 53.96
  • 47.58
  • 44.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.96e3
  • 2.96e3
90.10
  • 90.10
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.30e3
  • 3.30e3
  • 8.54e3
88.96
  • 88.96
  • 71.41
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.74e3
  • 3.74e3
87.47
  • 87.47
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.43e3
  • 9.43e3
68.42
  • 68.42
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.07
  • 63.07
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.40e4
  • 1.40e4
  • 1.44e4
52.97
  • 52.97
  • 51.79
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.24
  • 51.24
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.90
  • 48.90
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.74
  • 48.74
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.55e4
  • 1.55e4
47.96
  • 47.96
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.58e4
  • 1.58e4
47.21
  • 47.21
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.58e4
  • 1.58e4
47.08
  • 47.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.05
  • 46.05
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
36.93
  • 36.93
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.52
  • 36.52
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.97e4
  • 1.97e4
33.92
  • 33.92
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.65
  • 32.65
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.59
  • 32.59
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.09
  • 32.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Cross-references

EnsemblENSDARG00000036998 (arf3b)
ZFINZDB-GENE-030616-356 (arf3b)
EMBLAL591389, AL953886, BC163292, BC163310
Uniprot/SPTREMBLQ78AP9, Q78AP9_DANRE

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