D. rerio Gene: casz1 - ENSDARG00000037030 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037030
Namecasz1
Descriptioncastor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
OrganismDanio rerio (zebrafish)
Synonym(s)sb:eu580, wu:fk85f10

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.34e3
  • 2.34e3
  • 3.40e3
92.18
  • 92.18
  • 88.62
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
2.72e3
  • 2.72e3
  • 4.26e3
  • 6.50e3
  • 6.58e3
  • 8.96e3
  • 9.76e3
90.89
  • 90.89
  • 85.72
  • 78.25
  • 77.98
  • 69.98
  • 67.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.90e3
  • 2.90e3
90.28
  • 90.28
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.03e3
  • 3.03e3
89.86
  • 89.86
AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
3.52e3
  • 3.52e3
  • 3.73e3
  • 5.23e3
88.23
  • 88.23
  • 87.50
  • 82.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
3.68e3
  • 3.68e3
87.68
  • 87.68
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.73e3
  • 3.73e3
  • 1.17e4
87.52
  • 87.52
  • 60.93
AEIR
  • AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
3.73e3
  • 3.73e3
  • 3.98e3
  • 3.98e3
  • 6.22e3
  • 6.40e3
  • 6.40e3
87.50
  • 87.50
  • 86.66
  • 86.66
  • 79.16
  • 78.56
  • 78.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
3.98e3
  • 3.98e3
  • 4.67e3
  • 6.40e3
  • 6.54e3
  • 7.47e3
  • 7.86e3
  • 7.97e3
86.66
  • 86.66
  • 84.37
  • 78.56
  • 78.12
  • 74.99
  • 73.67
  • 73.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.26e3
  • 4.26e3
85.75
  • 85.75
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000026Segmentation:14-19 somites
4.27e3
  • 4.27e3
85.71
  • 85.71
AEIR
  • AEIR
UBERON:0004291heart rudiment
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
4.60e3
  • 4.60e3
  • 4.98e3
  • 6.64e3
84.61
  • 84.61
  • 83.33
  • 77.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
4.86e3
  • 4.86e3
  • 4.95e3
  • 5.85e3
  • 6.83e3
  • 6.95e3
  • 7.02e3
  • 7.22e3
  • 1.12e4
  • 1.14e4
  • 1.19e4
83.74
  • 83.74
  • 83.44
  • 80.41
  • 77.14
  • 76.73
  • 76.50
  • 75.82
  • 62.42
  • 61.68
  • 60.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
4.98e3
  • 4.98e3
  • 5.60e3
  • 8.54e3
  • 9.51e3
83.33
  • 83.33
  • 81.24
  • 71.42
  • 68.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
4.98e3
  • 4.98e3
  • 4.98e3
  • 5.23e3
  • 1.05e4
  • 1.08e4
83.33
  • 83.33
  • 83.33
  • 82.49
  • 64.98
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
4.98e3
  • 4.98e3
  • 5.23e3
  • 6.50e3
  • 6.72e3
  • 6.94e3
  • 9.71e3
  • 1.02e4
83.32
  • 83.32
  • 82.49
  • 78.25
  • 77.49
  • 76.77
  • 67.48
  • 65.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.10e3
  • 5.10e3
82.93
  • 82.93
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.40e3
  • 5.40e3
81.91
  • 81.91
AEIR
  • AEIR
UBERON:0003052midbrain-hindbrain boundary
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
5.69e3
  • 5.69e3
  • 6.15e3
  • 6.64e3
80.94
  • 80.94
  • 79.40
  • 77.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
5.81e3
  • 5.81e3
  • 5.81e3
  • 5.98e3
80.55
  • 80.55
  • 80.55
  • 79.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
5.85e3
  • 5.85e3
  • 5.98e3
  • 5.98e3
80.42
  • 80.42
  • 79.99
  • 79.99
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000540neuron
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
5.98e3
  • 5.98e3
  • 5.98e3
  • 6.54e3
  • 6.54e3
  • 6.79e3
  • 1.07e4
  • 1.10e4
79.99
  • 79.99
  • 79.99
  • 78.12
  • 78.12
  • 77.26
  • 64.27
  • 63.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
5.98e3
  • 5.98e3
  • 5.98e3
  • 6.79e3
  • 6.94e3
  • 7.47e3
  • 9.44e3
  • 9.67e3
79.99
  • 79.99
  • 79.99
  • 77.26
  • 76.77
  • 74.98
  • 68.40
  • 67.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
6.54e3
  • 6.54e3
  • 7.03e3
  • 1.03e4
  • 1.03e4
78.12
  • 78.12
  • 76.46
  • 65.61
  • 65.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
6.97e3
  • 6.97e3
  • 7.47e3
76.66
  • 76.66
  • 74.99
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
7.03e3
  • 7.03e3
  • 7.03e3
  • 8.40e3
  • 8.79e3
76.46
  • 76.46
  • 76.46
  • 71.86
  • 70.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
7.12e3
  • 7.12e3
  • 7.13e3
  • 7.65e3
  • 7.79e3
  • 8.31e3
  • 1.05e4
  • 1.21e4
  • 1.36e4
  • 1.38e4
  • 1.40e4
76.17
  • 76.17
  • 76.12
  • 74.38
  • 73.92
  • 72.18
  • 64.99
  • 59.35
  • 54.46
  • 53.64
  • 53.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.55e3
  • 7.55e3
  • 9.73e3
  • 9.79e3
74.70
  • 74.70
  • 67.42
  • 67.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003895hypaxial myotome region
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
8.30e3
  • 8.30e3
  • 8.30e3
72.22
  • 72.22
  • 72.22
AEIR
  • AEIR
  • AEIR
UBERON:0003084heart primordium
  • ZFS:0000026Segmentation:14-19 somites
8.79e3
  • 8.79e3
70.57
  • 70.57
AEIR
  • AEIR
UBERON:0009614hindbrain neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
9.19e3
  • 9.19e3
  • 9.19e3
  • 9.60e3
69.22
  • 69.22
  • 69.22
  • 67.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.23e3
  • 9.23e3
69.11
  • 69.11
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000026Segmentation:14-19 somites
9.28e3
  • 9.28e3
68.94
  • 68.94
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
9.67e3
  • 9.67e3
  • 9.96e3
  • 1.08e4
67.63
  • 67.63
  • 66.65
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.90
  • 63.90
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.10e4
  • 1.10e4
63.30
  • 63.30
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
  • 1.39e4
60.39
  • 60.39
  • 53.49
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.98
  • 58.98
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.66
  • 58.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.18
  • 56.18
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.35
  • 54.35
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.44e4
  • 1.44e4
51.67
  • 51.67
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.41
  • 50.41
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.51e4
  • 1.51e4
49.36
  • 49.36
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.55e4
  • 1.55e4
  • 1.75e4
48.04
  • 48.04
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.46
  • 43.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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