D. rerio Gene: slc7a2 - ENSDARG00000037097 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037097
Nameslc7a2
Descriptionsolute carrier family 7 (cationic amino acid transporter, y+ system), member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-5]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:103686

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
991
  • 991
96.68
  • 96.68
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
2.13e3
  • 2.13e3
  • 2.99e3
  • 3.32e3
  • 5.98e3
  • 6.22e3
  • 6.97e3
  • 7.97e3
  • 9.13e3
92.86
  • 92.86
  • 90.00
  • 88.89
  • 79.99
  • 79.16
  • 76.66
  • 73.32
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.97e3
  • 4.97e3
83.37
  • 83.37
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.12e3
  • 6.12e3
79.51
  • 79.51
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.04e3
  • 7.04e3
76.43
  • 76.43
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
76.11
  • 76.11
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.77
  • 73.77
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.12e3
  • 8.12e3
72.80
  • 72.80
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
9.15e3
  • 9.15e3
  • 1.31e4
  • 1.57e4
  • 1.58e4
  • 1.92e4
69.36
  • 69.36
  • 56.27
  • 47.56
  • 47.04
  • 35.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.41e3
  • 9.41e3
  • 1.60e4
68.50
  • 68.50
  • 46.39
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.58e3
  • 9.58e3
67.93
  • 67.93
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.78e3
  • 9.78e3
  • 9.86e3
67.26
  • 67.26
  • 66.99
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
  • 1.16e4
63.65
  • 63.65
  • 61.20
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.86
  • 62.86
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.44
  • 62.44
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.75
  • 60.75
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.68
  • 54.68
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.53e4
  • 1.53e4
48.64
  • 48.64
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.78
  • 42.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.01
  • 37.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX323012, CR384105, CT955983
EnsemblENSDARG00000037097 (slc7a2)
Uniprot/SPTREMBLF1Q9M9, F1Q9M9_DANRE
ZFINZDB-GENE-041212-5 (slc7a2)

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