D. rerio Gene: pwp2h - ENSDARG00000037109 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037109
Namepwp2h
DescriptionPWP2 periodic tryptophan protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-021031-3]
OrganismDanio rerio (zebrafish)
Synonym(s)cb471, titania, tti, zgc:56063
Orthologs(s)24 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
913
  • 913
  • 1.19e4
96.95
  • 96.95
  • 60.31
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.17e3
  • 1.17e3
96.07
  • 96.07
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
1.18e3
  • 1.18e3
  • 1.19e3
  • 2.00e3
  • 2.19e3
  • 2.29e3
96.05
  • 96.05
  • 96.03
  • 93.30
  • 92.69
  • 92.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
1.35e3
  • 1.35e3
  • 1.07e4
  • 1.09e4
95.48
  • 95.48
  • 64.26
  • 63.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.66e3
  • 1.66e3
94.45
  • 94.45
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000037Larval:Day 5
1.70e3
  • 1.70e3
  • 2.34e3
  • 2.71e3
  • 3.00e3
  • 3.63e3
  • 3.81e3
  • 4.22e3
  • 4.94e3
  • 5.65e3
  • 6.01e3
  • 6.54e3
  • 6.63e3
  • 7.97e3
  • 8.42e3
  • 8.96e3
  • 1.09e4
94.31
  • 94.31
  • 92.17
  • 90.93
  • 89.96
  • 87.86
  • 87.24
  • 85.88
  • 83.46
  • 81.10
  • 79.89
  • 78.12
  • 77.81
  • 73.32
  • 71.80
  • 69.99
  • 63.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.97e3
  • 1.97e3
93.39
  • 93.39
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.98e3
  • 1.98e3
93.37
  • 93.37
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.16e3
  • 2.16e3
92.78
  • 92.78
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
2.57e3
  • 2.57e3
  • 2.61e3
  • 3.17e3
  • 3.51e3
  • 4.09e3
  • 5.97e3
91.39
  • 91.39
  • 91.27
  • 89.39
  • 88.25
  • 86.32
  • 80.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
2.81e3
  • 2.81e3
  • 2.88e3
  • 3.66e3
  • 3.68e3
  • 3.71e3
  • 3.73e3
  • 5.73e3
  • 6.34e3
  • 7.79e3
  • 7.80e3
90.58
  • 90.58
  • 90.37
  • 87.75
  • 87.69
  • 87.60
  • 87.50
  • 80.81
  • 78.76
  • 73.92
  • 73.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.97e3
  • 2.97e3
90.07
  • 90.07
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • UBERON:0000066fully formed stage
3.44e3
  • 3.44e3
  • 6.48e3
  • 9.10e3
  • 9.99e3
  • 1.05e4
  • 1.09e4
88.50
  • 88.50
  • 78.30
  • 69.55
  • 66.55
  • 64.98
  • 63.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.68e3
  • 3.68e3
87.67
  • 87.67
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.81e3
  • 4.81e3
83.89
  • 83.89
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.98e3
  • 4.98e3
  • 5.98e3
  • 5.98e3
  • 6.97e3
  • 7.47e3
83.33
  • 83.33
  • 79.99
  • 79.99
  • 76.66
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
4.98e3
  • 4.98e3
  • 6.29e3
  • 6.29e3
  • 9.13e3
  • 9.13e3
  • 1.02e4
  • 1.05e4
83.32
  • 83.32
  • 78.94
  • 78.94
  • 69.43
  • 69.43
  • 65.77
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.07e3
  • 5.07e3
83.03
  • 83.03
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.17e3
  • 5.17e3
82.68
  • 82.68
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.04
  • 82.04
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.41e3
  • 5.41e3
81.88
  • 81.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
5.59e3
  • 5.59e3
  • 7.83e3
  • 9.34e3
  • 1.28e4
  • 1.31e4
81.28
  • 81.28
  • 73.79
  • 68.74
  • 57.13
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.38
  • 80.38
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
5.98e3
  • 5.98e3
  • 6.64e3
  • 6.64e3
  • 1.34e4
  • 1.49e4
79.99
  • 79.99
  • 77.77
  • 77.77
  • 54.99
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001357alar plate midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
5.98e3
  • 5.98e3
  • 6.29e3
  • 6.29e3
79.99
  • 79.99
  • 78.94
  • 78.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
6.05e3
  • 6.05e3
  • 1.12e4
  • 1.19e4
  • 1.24e4
79.73
  • 79.73
  • 62.50
  • 60.00
  • 58.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.15e3
  • 6.15e3
  • 9.36e3
79.42
  • 79.42
  • 68.67
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
6.15e3
  • 6.15e3
  • 6.29e3
  • 7.12e3
  • 9.96e3
79.40
  • 79.40
  • 78.94
  • 76.18
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
6.22e3
  • 6.22e3
  • 9.96e3
  • 1.12e4
  • 1.28e4
79.16
  • 79.16
  • 66.66
  • 62.50
  • 57.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
6.29e3
  • 6.29e3
  • 6.64e3
  • 7.47e3
  • 1.08e4
  • 1.12e4
78.94
  • 78.94
  • 77.77
  • 74.98
  • 63.87
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000032Pharyngula:High-pec
6.54e3
  • 6.54e3
  • 6.64e3
  • 7.47e3
  • 7.91e3
  • 8.22e3
  • 9.96e3
  • 9.96e3
  • 1.07e4
78.12
  • 78.12
  • 77.77
  • 74.99
  • 73.52
  • 72.48
  • 66.65
  • 66.65
  • 64.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
6.89e3
  • 6.89e3
  • 8.54e3
  • 8.79e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
76.92
  • 76.92
  • 71.41
  • 70.57
  • 69.98
  • 69.43
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005419pectoral appendage bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
7.12e3
  • 7.12e3
  • 8.30e3
  • 8.30e3
76.18
  • 76.18
  • 72.21
  • 72.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
7.77e3
  • 7.77e3
73.99
  • 73.99
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.90e3
  • 7.90e3
73.55
  • 73.55
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
7.99e3
  • 7.99e3
  • 8.75e3
73.25
  • 73.25
  • 70.71
AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.04e3
  • 8.04e3
  • 8.54e3
  • 1.03e4
  • 1.07e4
73.07
  • 73.07
  • 71.42
  • 65.61
  • 64.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
8.22e3
  • 8.22e3
  • 8.22e3
  • 8.54e3
  • 9.44e3
  • 9.44e3
  • 1.14e4
  • 1.14e4
72.48
  • 72.48
  • 72.48
  • 71.41
  • 68.40
  • 68.40
  • 61.75
  • 61.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003922pancreatic epithelial bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.30e3
  • 8.30e3
  • 9.33e3
72.22
  • 72.22
  • 68.74
AEIR
  • AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
8.40e3
  • 8.40e3
  • 8.40e3
  • 1.02e4
  • 1.02e4
71.86
  • 71.86
  • 71.86
  • 65.77
  • 65.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
8.42e3
  • 8.42e3
  • 8.87e3
  • 9.26e3
71.79
  • 71.79
  • 70.30
  • 68.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.62e3
  • 8.62e3
71.13
  • 71.13
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
9.31e3
  • 9.31e3
  • 1.01e4
68.83
  • 68.83
  • 66.28
AEIR
  • AEIR
  • AEIR
UBERON:0000926mesoderm
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
9.34e3
  • 9.34e3
  • 1.10e4
  • 1.10e4
  • 1.10e4
68.74
  • 68.74
  • 63.32
  • 63.32
  • 63.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.52e3
  • 9.52e3
68.13
  • 68.13
AEIR
  • AEIR
UBERON:0011004pharyngeal arch cartilage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
66.67
  • 66.67
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.06e4
  • 1.06e4
  • 1.12e4
64.44
  • 64.44
  • 62.36
AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.08e4
  • 1.08e4
  • 1.08e4
  • 1.16e4
63.87
  • 63.87
  • 63.87
  • 61.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
1.10e4
  • 1.10e4
  • 1.10e4
  • 1.14e4
63.14
  • 63.14
  • 63.14
  • 61.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.08
  • 63.08
AEIR
  • AEIR
UBERON:0000924ectoderm
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.19e4
  • 1.19e4
62.49
  • 62.49
  • 62.49
  • 59.99
  • 59.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.14e4
  • 1.14e4
  • 1.16e4
61.75
  • 61.75
  • 61.09
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0003072optic cup
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.99
  • 54.99
AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000033Hatching:Long-pec
1.36e4
  • 1.36e4
54.53
  • 54.53
AEIR
  • AEIR
UBERON:0003052midbrain-hindbrain boundary
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
49.98
  • 49.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species17 genesCompare expression
Bilateria23 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000037109.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000037109.

Cross-references

EnsemblENSDARG00000037109 (pwp2h)
ZFINZDB-GENE-021031-3 (pwp2h)
EMBLCU469541, CU570895
Uniprot/SPTREMBLF1RAC4, F1RAC4_DANRE

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