D. rerio Gene: mat2ab - ENSDARG00000037121 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037121
Namemat2ab
Descriptionmethionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:110847

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
317
  • 317
98.94
  • 98.94
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.82e3
  • 1.82e3
93.92
  • 93.92
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.65e3
  • 2.65e3
  • 1.59e4
91.15
  • 91.15
  • 46.65
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.87e3
  • 2.87e3
90.39
  • 90.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.53e3
  • 4.53e3
84.83
  • 84.83
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.77e3
  • 4.77e3
  • 7.73e3
84.04
  • 84.04
  • 74.12
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
  • 9.30e3
82.83
  • 82.83
  • 68.86
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
5.13e3
  • 5.13e3
  • 6.26e3
  • 6.34e3
  • 6.85e3
  • 9.91e3
82.81
  • 82.81
  • 79.04
  • 78.79
  • 77.08
  • 66.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.33e3
  • 5.33e3
82.16
  • 82.16
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
5.62e3
  • 5.62e3
  • 7.72e3
81.18
  • 81.18
  • 74.15
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.84e3
  • 5.84e3
80.44
  • 80.44
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.85e3
  • 5.85e3
80.43
  • 80.43
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.96e3
  • 5.96e3
80.05
  • 80.05
AEIR
  • AEIR
UBERON:0003080anterior neural tube
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.74e3
  • 8.74e3
70.75
  • 70.75
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.81e3
  • 8.81e3
70.49
  • 70.49
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
9.50e3
  • 9.50e3
  • 1.02e4
68.19
  • 68.19
  • 66.01
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.87e3
  • 9.87e3
66.94
  • 66.94
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.40
  • 66.40
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.46
  • 63.46
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.14e4
  • 1.14e4
61.97
  • 61.97
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.14e4
  • 1.14e4
61.97
  • 61.97
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.01
  • 60.01
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.21
  • 59.21
AEIR
  • AEIR
UBERON:0003072optic cup
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.99
  • 54.99
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000029Pharyngula:Prim-5
1.37e4
  • 1.37e4
54.13
  • 54.13
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.05
  • 51.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC091929, BC164405, CU928129
EnsemblENSDARG00000037121 (mat2ab)
Uniprot/SPTREMBLQ58EF9, Q58EF9_DANRE
ZFINZDB-GENE-050327-6 (mat2ab)

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