D. rerio Gene: denr - ENSDARG00000037229 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037229
Namedenr
Descriptiondensity-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
OrganismDanio rerio (zebrafish)
Synonym(s)im:6891640, zgc:113309, zgc:92629

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
849
  • 849
97.16
  • 97.16
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
892
  • 892
97.02
  • 97.02
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
1.04e3
  • 1.04e3
  • 1.23e3
  • 1.26e3
  • 1.70e3
  • 1.82e3
  • 1.83e3
  • 1.84e3
  • 1.95e3
  • 2.25e3
  • 2.36e3
96.53
  • 96.53
  • 95.88
  • 95.79
  • 94.31
  • 93.92
  • 93.86
  • 93.84
  • 93.47
  • 92.47
  • 92.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
  • 4.81e3
95.75
  • 95.75
  • 83.91
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
1.35e3
  • 1.35e3
  • 1.49e3
  • 1.83e3
  • 2.12e3
  • 2.57e3
  • 3.30e3
95.50
  • 95.50
  • 95.03
  • 93.89
  • 92.92
  • 91.40
  • 88.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.41e3
  • 1.41e3
95.27
  • 95.27
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
1.46e3
  • 1.46e3
  • 1.69e3
  • 2.35e3
  • 2.75e3
  • 3.46e3
95.11
  • 95.11
  • 94.34
  • 92.15
  • 90.80
  • 88.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.48e3
  • 1.48e3
95.03
  • 95.03
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.64e3
  • 1.64e3
94.52
  • 94.52
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
1.78e3
  • 1.78e3
  • 1.95e3
  • 2.20e3
  • 3.73e3
  • 1.17e4
  • 1.20e4
94.05
  • 94.05
  • 93.47
  • 92.64
  • 87.51
  • 60.84
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.86e3
  • 1.86e3
93.79
  • 93.79
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.90e3
  • 1.90e3
93.64
  • 93.64
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.92e3
  • 1.92e3
93.59
  • 93.59
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.93e3
  • 1.93e3
  • 3.36e3
93.55
  • 93.55
  • 88.74
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.14e3
  • 2.14e3
92.83
  • 92.83
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.21e3
  • 2.21e3
92.61
  • 92.61
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.25e3
  • 2.25e3
92.49
  • 92.49
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.25e3
  • 2.25e3
92.48
  • 92.48
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.34e3
  • 2.34e3
92.16
  • 92.16
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.38e3
  • 2.38e3
92.02
  • 92.02
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000017Gastrula:50%-epiboly
2.41e3
  • 2.41e3
  • 2.74e3
  • 2.75e3
  • 3.01e3
  • 3.20e3
  • 3.23e3
  • 3.27e3
  • 3.46e3
  • 3.46e3
  • 3.58e3
  • 3.87e3
  • 4.62e3
  • 5.45e3
  • 7.57e3
  • 1.03e4
  • 1.14e4
91.92
  • 91.92
  • 90.82
  • 90.81
  • 89.93
  • 89.30
  • 89.19
  • 89.05
  • 88.43
  • 88.41
  • 88.03
  • 87.05
  • 84.53
  • 81.76
  • 74.66
  • 65.61
  • 61.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.46e3
  • 2.46e3
91.76
  • 91.76
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
91.13
  • 91.13
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
91.00
  • 91.00
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.93
  • 90.93
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
  • 3.55e3
90.33
  • 90.33
  • 88.10
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.99e3
  • 2.99e3
89.99
  • 89.99
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
  • 4.31e3
89.69
  • 89.69
  • 85.58
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
3.34e3
  • 3.34e3
  • 3.77e3
  • 4.39e3
88.83
  • 88.83
  • 87.39
  • 85.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.74e3
  • 3.74e3
87.49
  • 87.49
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
80.03
  • 80.03
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
1.08e4
  • 1.08e4
  • 1.08e4
  • 1.10e4
  • 1.12e4
  • 1.14e4
  • 1.17e4
  • 1.20e4
63.87
  • 63.87
  • 63.87
  • 63.32
  • 62.48
  • 61.75
  • 60.70
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.14
  • 61.14
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
1.16e4
  • 1.16e4
  • 1.18e4
  • 1.20e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
  • 1.25e4
61.09
  • 61.09
  • 60.50
  • 59.98
  • 59.98
  • 58.31
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.23e4
  • 1.23e4
  • 1.23e4
  • 1.23e4
58.80
  • 58.80
  • 58.80
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.61
  • 48.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC076117, BC095896
EnsemblENSDARG00000037229 (denr)
Uniprot/SWISSPROTDENR_DANRE, Q6DH65
ZFINZDB-GENE-040718-450 (denr)

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