Gene: mipa - ENSDARG00000037285 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000037285
Name	mipa
Description	major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
Organism	Danio rerio (zebrafish)
Synonym(s)	aqp0a, mip1, zgc:100858
Orthologs(s)	17 orthologs
Paralog(s)	14 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	311 311	98.96 98.96	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	1.45e3 1.45e3 1.82e3	95.15 95.15 93.92	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5	1.62e3 1.62e3 1.99e3 4.57e3 7.77e3 1.16e4	94.59 94.59 93.33 84.69 73.97 61.31	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.62e3 1.62e3 1.82e3	94.57 94.57 93.90	AEIR AEIR AEIR
UBERON:0000019	camera-type eye	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000035Larval:Protruding-mouth	7.48e3 7.48e3 1.32e4	74.97 74.97 55.82	AEIR AEIR AEIR
UBERON:0000965	lens of camera-type eye	[+] 3 stages ZFS:0000033Hatching:Long-pec ZFS:0000030Pharyngula:Prim-15 ZFS:0000031Pharyngula:Prim-25	1.10e4 1.10e4 1.18e4 1.34e4	63.32 63.32 60.50 54.97	AEIR AEIR AEIR AEIR
UBERON:0005426	lens vesicle	[+] 2 stages ZFS:0000029Pharyngula:Prim-5 ZFS:0000028Segmentation:26+ somites	1.34e4 1.34e4 1.40e4	54.97 54.97 53.10	AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.84e4 1.84e4	38.51 38.51	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.87e4 1.87e4	37.37 37.37	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.37e4 2.37e4	20.59 20.59	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
In situ hybridization data: ZFIN
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000135517 MIP ENSMUSG00000025389 Mip ENSPTRG00000005099 MIP ENSGGOG00000016571 MIP ENSMMUG00000010334 MIP ENSRNOG00000003132 Mip ENSBTAG00000010127 MIP ENSSSCG00000000400 MIP ENSECAG00000008856 MIP ENSOCUG00000022630 MIP ENSCAFG00000000128 MIP ENSFCAG00000012025 MIP ENSCPOG00000002347 Mip ENSEEUG00000007547 MIP ENSOANG00000012532 MIP ENSACAG00000016525 MIP ENSXETG00000021804 mip	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000037285.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Euteleostomi	1 gene ENSDARG00000013963 mipb	Compare expression	[+]
Eumetazoa	4 genes ENSDARG00000010565 aqp4 ENSDARG00000013963 mipb ENSDARG00000023713 aqp1a.1 ENSDARG00000091027 aqp1a.2	Compare expression	[+]
Opisthokonta	5 genes ENSDARG00000010565 aqp4 ENSDARG00000013963 mipb ENSDARG00000023713 aqp1a.1 ENSDARG00000091027 aqp1a.2 ENSDARG00000103927 CR450824.1	Compare expression	[+]
Eukaryota	14 genes ENSDARG00000003808 aqp3a ENSDARG00000007086 aqp10a ENSDARG00000010565 aqp4 ENSDARG00000013963 mipb ENSDARG00000023713 aqp1a.1 ENSDARG00000026787 aqp7 ENSDARG00000045141 aqp8a.1 ENSDARG00000053480 aqp9b ENSDARG00000058678 aqp10b ENSDARG00000069518 aqp3b ENSDARG00000071592 aqp8a.2 ENSDARG00000089749 aqp8b ENSDARG00000091027 aqp1a.2 ENSDARG00000103927 CR450824.1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000037285.

Cross-references

Ensembl	ENSDARG00000037285 (mipa)
ZFIN	ZDB-GENE-040801-41 (mipa)
EMBL	BC077129, CR354433, FJ666326
Uniprot/SPTREMBL	Q6DEI6, Q6DEI6_DANRE