D. rerio Gene: kdelr2b - ENSDARG00000037361 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037361
Namekdelr2b
DescriptionKDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4189]
OrganismDanio rerio (zebrafish)
Synonym(s)kdelr2l, kdelr2l {eco:0000313|embl:aah56694.1,gn eco:0000313|zfin:zdb-gene-030131-4189}, wu:fa93g04, wu:fc79e05, zgc:66047

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
381
  • 381
  • 1.62e3
98.73
  • 98.73
  • 94.56
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
950
  • 950
  • 994
  • 1.10e3
  • 1.24e3
  • 1.27e3
  • 1.32e3
  • 1.52e3
  • 2.01e3
  • 2.65e3
  • 4.05e3
96.82
  • 96.82
  • 96.67
  • 96.32
  • 95.86
  • 95.74
  • 95.59
  • 94.93
  • 93.28
  • 91.14
  • 86.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
1.22e3
  • 1.22e3
  • 1.31e3
  • 1.42e3
  • 1.70e3
  • 1.75e3
  • 1.92e3
  • 2.47e3
  • 2.51e3
  • 3.75e3
  • 4.70e3
  • 6.15e3
  • 6.49e3
  • 7.76e3
  • 9.90e3
95.93
  • 95.93
  • 95.60
  • 95.25
  • 94.31
  • 94.13
  • 93.57
  • 91.74
  • 91.59
  • 87.46
  • 84.27
  • 79.41
  • 78.27
  • 74.03
  • 66.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.25e3
  • 1.25e3
95.82
  • 95.82
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.35e3
  • 1.35e3
95.48
  • 95.48
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.47e3
  • 1.47e3
95.08
  • 95.08
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.49e3
  • 1.49e3
95.02
  • 95.02
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.56e3
  • 1.56e3
  • 2.46e3
  • 3.14e3
  • 9.88e3
94.76
  • 94.76
  • 91.76
  • 89.48
  • 66.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.57e3
  • 1.57e3
94.75
  • 94.75
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.58e3
  • 1.58e3
94.72
  • 94.72
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.66e3
  • 1.66e3
94.45
  • 94.45
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.85e3
  • 1.85e3
  • 6.38e3
93.80
  • 93.80
  • 78.63
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.86e3
  • 1.86e3
93.78
  • 93.78
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.02e3
  • 2.02e3
  • 5.69e3
93.22
  • 93.22
  • 80.96
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.09e3
  • 2.09e3
92.99
  • 92.99
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.12e3
  • 2.12e3
92.89
  • 92.89
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
2.31e3
  • 2.31e3
  • 2.62e3
  • 2.91e3
92.25
  • 92.25
  • 91.22
  • 90.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
2.37e3
  • 2.37e3
  • 3.71e3
  • 5.17e3
  • 6.53e3
  • 6.58e3
  • 7.75e3
92.07
  • 92.07
  • 87.60
  • 82.70
  • 78.12
  • 77.98
  • 74.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
90.81
  • 90.81
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.79e3
  • 2.79e3
90.65
  • 90.65
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.93e3
  • 2.93e3
90.19
  • 90.19
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.98e3
  • 2.98e3
90.01
  • 90.01
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.09e3
  • 3.09e3
89.67
  • 89.67
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.08e3
  • 4.08e3
  • 5.52e3
86.33
  • 86.33
  • 81.51
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.09e3
  • 4.09e3
86.31
  • 86.31
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.53e3
  • 4.53e3
84.84
  • 84.84
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
81.52
  • 81.52
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.08e3
  • 6.08e3
79.65
  • 79.65
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.33e3
  • 6.33e3
78.79
  • 78.79
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
6.89e3
  • 6.89e3
  • 8.54e3
  • 8.79e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
76.92
  • 76.92
  • 71.41
  • 70.57
  • 69.98
  • 69.43
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
7.81e3
  • 7.81e3
  • 8.83e3
  • 8.87e3
  • 9.05e3
  • 9.36e3
73.85
  • 73.85
  • 70.42
  • 70.31
  • 69.71
  • 68.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.46e3
  • 9.46e3
68.32
  • 68.32
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.00e4
  • 1.00e4
66.48
  • 66.48
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.93
  • 64.93
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.20e4
  • 1.20e4
  • 1.22e4
  • 1.22e4
  • 1.31e4
  • 1.32e4
  • 1.32e4
  • 1.34e4
59.98
  • 59.98
  • 59.06
  • 59.06
  • 56.23
  • 55.97
  • 55.86
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.27e4
  • 1.27e4
  • 1.29e4
  • 1.34e4
  • 1.34e4
57.47
  • 57.47
  • 56.79
  • 55.24
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.42e4
  • 1.42e4
  • 1.42e4
52.60
  • 52.60
  • 52.60
AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.42e4
  • 1.42e4
  • 1.42e4
  • 1.42e4
52.47
  • 52.47
  • 52.47
  • 52.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000924ectoderm
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0008895splanchnocranium
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
  • 1.49e4
49.99
  • 49.99
  • 49.99
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC056694, CU565526
EnsemblENSDARG00000037361 (kdelr2b)
Uniprot/SPTREMBLQ6PH70, Q6PH70_DANRE
ZFINZDB-GENE-030131-4189 (kdelr2b)

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