D. rerio Gene: lim2.3 - ENSDARG00000037402 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037402
Namelim2.3
Descriptionlens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]
OrganismDanio rerio (zebrafish)
Synonym(s)mp19-3, zgc:92719
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
259
  • 259
99.14
  • 99.14
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.01e3
  • 1.01e3
  • 1.48e3
96.62
  • 96.62
  • 95.06
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.31e3
  • 1.31e3
  • 5.56e3
95.62
  • 95.62
  • 81.40
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.73e3
  • 1.73e3
  • 2.15e3
  • 5.07e3
  • 9.75e3
  • 1.34e4
94.22
  • 94.22
  • 92.81
  • 83.04
  • 67.36
  • 55.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
5.43e3
  • 5.43e3
  • 9.13e3
81.81
  • 81.81
  • 69.43
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
5.66e3
  • 5.66e3
81.05
  • 81.05
AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
8.22e3
  • 8.22e3
  • 1.23e4
  • 1.31e4
72.48
  • 72.48
  • 58.80
  • 56.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.26e4
  • 1.26e4
  • 1.58e4
57.94
  • 57.94
  • 47.18
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.53e4
  • 1.53e4
48.72
  • 48.72
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.01
  • 39.01
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
29.85
  • 29.85
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
24.13
  • 24.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000037402.

Cross-references

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