D. rerio Gene: pm20d1.1 - ENSDARG00000037551 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037551
Namepm20d1.1
Descriptionpeptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:123113

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
581
  • 581
98.06
  • 98.06
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.46e3
  • 1.46e3
95.11
  • 95.11
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.62e3
  • 3.62e3
87.90
  • 87.90
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.56e3
  • 4.56e3
  • 2.19e4
84.73
  • 84.73
  • 26.77
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.77e3
  • 4.77e3
84.04
  • 84.04
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
5.46e3
  • 5.46e3
  • 6.12e3
81.73
  • 81.73
  • 79.50
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.74e3
  • 7.74e3
74.07
  • 74.07
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
7.86e3
  • 7.86e3
  • 1.57e4
73.69
  • 73.69
  • 47.41
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.93e3
  • 7.93e3
73.45
  • 73.45
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
8.24e3
  • 8.24e3
  • 1.90e4
  • 1.92e4
  • 2.33e4
72.42
  • 72.42
  • 36.54
  • 35.80
  • 21.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.49e3
  • 8.49e3
71.58
  • 71.58
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.11
  • 66.11
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.68
  • 65.68
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.56
  • 54.56
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.61
  • 47.61
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.90
  • 46.90
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.10
  • 39.10
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
  • 2.16e4
38.08
  • 38.08
  • 27.80
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
  • 2.84e4
32.54
  • 32.54
  • 4.89
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
24.11
  • 24.11
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.35e4
  • 2.35e4
21.15
  • 21.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR352232
EnsemblENSDARG00000037551 (pm20d1.1)
Uniprot/SPTREMBLE9QES0, E9QES0_DANRE, F1QIR5, F1QIR5_DANRE
ZFINZDB-GENE-051120-102 (pm20d1.1)

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