Gene: SYNPR (1 to many) - ENSDARG00000037587 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000037587
Name	SYNPR (1 to many)
Description	si:dkey-30j16.3 [Source:ZFIN;Acc:ZDB-GENE-141212-294]
Organism	Danio rerio (zebrafish)
Synonym(s)	mgc26651, spo, synpr
Orthologs(s)	18 orthologs
Paralog(s)	6 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	2.07e3 2.07e3	93.07 93.07	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	2.68e3 2.68e3	91.03 91.03	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	5.17e3 5.17e3 1.49e4	82.68 82.68 50.06	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 3 stages ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage	7.57e3 7.57e3 1.81e4 2.35e4	74.67 74.67 39.29 21.39	AEIR AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	7.82e3 7.82e3	73.82 73.82	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.12e4 1.12e4 2.13e4	62.50 62.50 28.62	AEIR AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	1.20e4 1.20e4	59.67 59.67	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.43e4 1.43e4	52.14 52.14	AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.54e4 1.54e4	48.41 48.41	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.65e4 1.65e4	44.70 44.70	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage ZFS:0000036Larval:Day 4	1.87e4 1.87e4	37.31 37.31	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.87e4 1.87e4	37.28 37.28	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.14e4 2.14e4	28.38 28.38	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	2.21e4 2.21e4	25.95 25.95	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000163630 SYNPR ENSMUSG00000056296 Synpr ENSPTRG00000015073 SYNPR ENSGGOG00000002513 SYNPR ENSMMUG00000023718 SYNPR ENSRNOG00000008203 Synpr ENSBTAG00000000265 SYNPR ENSSSCG00000027617 SYNPR ENSECAG00000011166 SYNPR ENSOCUG00000012918 SYNPR ENSCAFG00000029431 SYNPR ENSFCAG00000003858 SYNPR ENSCPOG00000012817 SYNPR ENSMODG00000002954 SYNPR ENSGALG00000007284 SYNPR ENSACAG00000001205 SYNPR ENSXETG00000022240 synpr	Compare expression	[+]
Bilateria	18 species Homo sapiens (human) Mus musculus (mouse) Caenorhabditis elegans (nematode) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	18 genes ENSG00000163630 SYNPR ENSMUSG00000056296 Synpr WBGene00004979 sph-1 ENSPTRG00000015073 SYNPR ENSGGOG00000002513 SYNPR ENSMMUG00000023718 SYNPR ENSRNOG00000008203 Synpr ENSBTAG00000000265 SYNPR ENSSSCG00000027617 SYNPR ENSECAG00000011166 SYNPR ENSOCUG00000012918 SYNPR ENSCAFG00000029431 SYNPR ENSFCAG00000003858 SYNPR ENSCPOG00000012817 SYNPR ENSMODG00000002954 SYNPR ENSGALG00000007284 SYNPR ENSACAG00000001205 SYNPR ENSXETG00000022240 synpr	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000037587.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	4 genes ENSDARG00000000690 sypl2b ENSDARG00000002230 sypb ENSDARG00000042974 sypa ENSDARG00000055307 sypl2a	Compare expression	[+]
Bilateria	5 genes ENSDARG00000000690 sypl2b ENSDARG00000002230 sypb ENSDARG00000042974 sypa ENSDARG00000055307 sypl2a ENSDARG00000077356 sypl1	Compare expression	[+]
Eumetazoa	6 genes ENSDARG00000000690 sypl2b ENSDARG00000002230 sypb ENSDARG00000042974 sypa ENSDARG00000044278 synpr ENSDARG00000055307 sypl2a ENSDARG00000077356 sypl1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000037587.

Cross-references

Ensembl	ENSDARG00000037587 (SYNPR (1 to many))
HGNC	HGNC:16507 (SYNPR (1 to many))
ZFIN	ZDB-GENE-141212-294 (si:dkey-30j16.3)
EMBL	BX324130
Uniprot/SPTREMBL	E7FGY3, E7FGY3_DANRE