D. rerio Gene: rnf175 - ENSDARG00000037647 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037647
Namernf175
Descriptionring finger protein 175 [Source:ZFIN;Acc:ZDB-GENE-040426-1104]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:56665

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.58e3
  • 1.58e3
94.73
  • 94.73
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.39
  • 94.39
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
2.31e3
  • 2.31e3
  • 5.42e3
  • 1.45e4
92.27
  • 92.27
  • 81.86
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.99e3
  • 2.99e3
90.00
  • 90.00
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.10e3
  • 3.10e3
  • 5.51e3
89.63
  • 89.63
  • 81.55
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
3.34e3
  • 3.34e3
  • 4.90e3
  • 6.24e3
  • 6.24e3
  • 6.81e3
  • 6.98e3
  • 7.88e3
  • 1.07e4
  • 1.11e4
  • 1.15e4
88.81
  • 88.81
  • 83.60
  • 79.10
  • 79.10
  • 77.19
  • 76.63
  • 73.62
  • 64.26
  • 62.84
  • 61.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.69e3
  • 3.69e3
87.65
  • 87.65
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
3.79e3
  • 3.79e3
  • 5.05e3
  • 7.18e3
  • 9.34e3
  • 1.10e4
87.32
  • 87.32
  • 83.09
  • 75.95
  • 68.73
  • 63.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
86.68
  • 86.68
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.05e3
  • 4.05e3
86.44
  • 86.44
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.31e3
  • 4.31e3
  • 5.03e3
  • 5.70e3
85.58
  • 85.58
  • 83.16
  • 80.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.45e3
  • 4.45e3
  • 1.45e4
85.10
  • 85.10
  • 51.36
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.76e3
  • 4.76e3
84.06
  • 84.06
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
4.98e3
  • 4.98e3
  • 5.84e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.83e3
  • 6.88e3
  • 6.97e3
  • 7.03e3
  • 7.20e3
  • 7.47e3
  • 7.47e3
  • 7.54e3
  • 7.91e3
  • 8.43e3
  • 8.96e3
  • 8.96e3
  • 1.02e4
  • 1.11e4
  • 1.11e4
  • 1.31e4
  • 1.32e4
  • 1.46e4
  • 1.47e4
  • 1.49e4
  • 1.50e4
  • 1.51e4
83.33
  • 83.33
  • 80.44
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.13
  • 76.98
  • 76.66
  • 76.46
  • 75.90
  • 74.99
  • 74.99
  • 74.75
  • 73.52
  • 71.78
  • 69.99
  • 69.99
  • 65.75
  • 62.88
  • 62.78
  • 56.10
  • 55.87
  • 51.25
  • 50.68
  • 49.99
  • 49.82
  • 49.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
5.03e3
  • 5.03e3
  • 5.09e3
  • 6.19e3
  • 8.73e3
83.17
  • 83.17
  • 82.95
  • 79.27
  • 70.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.06e3
  • 5.06e3
  • 6.29e3
83.05
  • 83.05
  • 78.93
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.78e3
  • 5.78e3
80.66
  • 80.66
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.99e3
  • 5.99e3
79.94
  • 79.94
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.03e3
  • 6.03e3
79.81
  • 79.81
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.71
  • 78.71
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.45e3
  • 6.45e3
78.39
  • 78.39
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.51e3
  • 6.51e3
  • 6.91e3
78.19
  • 78.19
  • 76.86
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.82e3
  • 6.82e3
77.18
  • 77.18
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.88e3
  • 6.88e3
76.96
  • 76.96
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.02e3
  • 7.02e3
76.51
  • 76.51
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.16e3
  • 7.16e3
76.03
  • 76.03
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.29e3
  • 7.29e3
75.61
  • 75.61
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.38e3
  • 7.38e3
75.29
  • 75.29
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.25e3
  • 8.25e3
72.39
  • 72.39
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.21e3
  • 9.21e3
69.18
  • 69.18
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.68e3
  • 9.68e3
67.60
  • 67.60
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.05e4
  • 1.05e4
65.00
  • 65.00
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
1.14e4
  • 1.14e4
  • 1.29e4
  • 1.40e4
61.67
  • 61.67
  • 56.72
  • 52.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.50e4
55.16
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX548256
EnsemblENSDARG00000037647 (rnf175)
Uniprot/SPTREMBLB8A5M0, B8A5M0_DANRE, F1QUH4, F1QUH4_DANRE
ZFINZDB-GENE-040426-1104 (rnf175)

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