Gene: pcdh2aa1 - ENSDARG00000037695
- Danio rerio (zebrafish)
General information
| Ensembl ID | ENSDARG00000037695 |
|---|---|
| Name | pcdh2aa1 |
| Description | protocadherin 2 alpha a 1 [Source:ZFIN;Acc:ZDB-GENE-041118-13] |
| Organism | Danio rerio (zebrafish) |
| Synonym(s) | pcdh2a8, pcdh2aa1-vcp |
| Paralog(s) | 68 paralogs |
Expression
| Anat. entity ID | Anatomical entity | Developmental stage(s) | Rank score | Expression score | Sources |
|---|---|---|---|---|---|
| UBERON:0000922 | embryo |
| 1.12e4
| 62.36
| AEIR
|
| UBERON:0000966 | retina |
| 1.24e4
| 58.37
| AEIR
|
| UBERON:0000955 | brain |
| 1.29e4
| 56.91
| AEIR
|
| UBERON:0000033 | head |
| 1.80e4
| 39.84
| AEIR
|
| UBERON:0000970 | eye |
| 1.87e4
| 37.43
| AEIR
|
| UBERON:0002548 | larva |
| 1.97e4
| 34.02
| AEIR
|
| A | Affymetrix |
|---|---|
| E | EST |
| I | In Situ |
| R | RNA-Seq |
| data |
| no data |
| 3.25e4 | lightgrey: low confidence scores |
|---|---|
| important score variation |
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.
Paralogs (same species)
Paralogy information comes from OMA : ENSDARG00000037695.
Cross-references
| Ensembl | ENSDARG00000037695 (pcdh2aa1) |
|---|---|
| ZFIN | ZDB-GENE-041118-13 (pcdh2aa1) |
| EMBL | CU896649 |
| Uniprot/SPTREMBL | F1RE55, F1RE55_DANRE |