D. rerio Gene: fscn1b - ENSDARG00000037747 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037747
Namefscn1b
Descriptionfascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-160d14.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.62e3
  • 1.62e3
  • 1.34e4
94.59
  • 94.59
  • 54.99
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
  • 1.11e4
85.76
  • 85.76
  • 62.73
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
8.55e3
  • 8.55e3
  • 1.35e4
  • 2.07e4
71.39
  • 71.39
  • 54.75
  • 30.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.18
  • 66.18
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.33e4
  • 1.33e4
  • 1.42e4
55.53
  • 55.53
  • 52.60
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.36e4
  • 1.36e4
54.48
  • 54.48
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.46e4
  • 1.46e4
  • 1.51e4
51.26
  • 51.26
  • 49.44
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.40
  • 50.40
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.16
  • 47.16
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.68e4
  • 1.68e4
  • 1.82e4
43.70
  • 43.70
  • 39.20
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.70
  • 40.70
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.35
  • 38.35
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.34
  • 35.34
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.30
  • 24.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLAL928650
EnsemblENSDARG00000037747 (fscn1b)
Uniprot/SPTREMBLA0A0A0MPL5, A0A0A0MPL5_DANRE
ZFINZDB-GENE-120507-1 (fscn1b)

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