D. rerio Gene: uncx4.1 - ENSDARG00000037760 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037760
Nameuncx4.1
DescriptionUnc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
OrganismDanio rerio (zebrafish)
Synonym(s)uncx

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.81e3
  • 5.81e3
  • 2.01e4
80.55
  • 80.55
  • 32.72
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
6.23e3
  • 6.23e3
  • 9.24e3
79.15
  • 79.15
  • 69.06
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
7.56e3
  • 7.56e3
  • 1.50e4
74.70
  • 74.70
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
7.68e3
  • 7.68e3
  • 8.39e3
  • 8.46e3
  • 8.58e3
  • 8.75e3
74.27
  • 74.27
  • 71.89
  • 71.66
  • 71.27
  • 70.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.86e3
  • 7.86e3
73.69
  • 73.69
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
8.72e3
  • 8.72e3
  • 9.34e3
  • 1.29e4
  • 1.34e4
  • 1.34e4
70.81
  • 70.81
  • 68.73
  • 56.79
  • 54.97
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.74e3
  • 8.74e3
70.72
  • 70.72
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
9.90e3
  • 9.90e3
  • 1.33e4
66.87
  • 66.87
  • 55.40
AEIR
  • AEIR
  • AEIR
UBERON:0003062primitive knot
  • ZFS:0000019Gastrula:Shield
1.22e4
  • 1.22e4
59.08
  • 59.08
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.90
  • 58.90
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.77
  • 58.77
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.29e4
  • 1.29e4
  • 1.31e4
56.82
  • 56.82
  • 56.28
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.88
  • 51.88
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.47
  • 50.47
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.28
  • 48.28
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.42
  • 46.42
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.43
  • 35.43
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.73
  • 29.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCT826402
EnsemblENSDARG00000037760 (uncx4.1)
Uniprot/SPTREMBLF1R1U2, F1R1U2_DANRE
ZFINZDB-GENE-050714-1 (uncx4.1)

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