D. rerio Gene: rybpa - ENSDARG00000037773 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037773
Namerybpa
DescriptionRING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
OrganismDanio rerio (zebrafish)
Synonym(s)cb337, rybp, wu:fi34f03

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
858
  • 858
  • 1.51e3
  • 1.53e3
  • 1.63e3
  • 2.61e3
97.13
  • 97.13
  • 94.93
  • 94.88
  • 94.55
  • 91.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.34e3
  • 2.34e3
92.18
  • 92.18
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.98e3
  • 2.98e3
90.03
  • 90.03
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
3.35e3
  • 3.35e3
  • 6.03e3
  • 7.10e3
  • 7.13e3
  • 7.43e3
  • 8.74e3
  • 8.78e3
  • 9.52e3
  • 9.87e3
  • 9.99e3
88.79
  • 88.79
  • 79.80
  • 76.24
  • 76.12
  • 75.12
  • 70.73
  • 70.60
  • 68.11
  • 66.95
  • 66.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
3.54e3
  • 3.54e3
  • 4.77e3
  • 5.31e3
  • 5.72e3
  • 6.18e3
  • 6.60e3
88.16
  • 88.16
  • 84.03
  • 82.21
  • 80.86
  • 79.30
  • 77.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.79e3
  • 3.79e3
  • 1.56e4
87.30
  • 87.30
  • 47.70
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
3.94e3
  • 3.94e3
  • 4.89e3
  • 6.50e3
  • 8.16e3
  • 1.34e4
86.82
  • 86.82
  • 83.62
  • 78.23
  • 72.69
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.96e3
  • 3.96e3
86.75
  • 86.75
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.44e3
  • 4.44e3
  • 1.47e4
85.12
  • 85.12
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.97e3
  • 4.97e3
83.36
  • 83.36
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000109gastrula stage
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
5.38e3
  • 5.38e3
  • 5.39e3
  • 5.54e3
  • 5.87e3
  • 5.88e3
  • 6.15e3
  • 6.34e3
  • 7.40e3
  • 8.46e3
  • 8.56e3
  • 9.73e3
  • 9.75e3
  • 1.08e4
  • 1.16e4
  • 1.19e4
  • 1.37e4
  • 1.45e4
  • 1.47e4
81.99
  • 81.99
  • 81.94
  • 81.47
  • 80.35
  • 80.30
  • 79.42
  • 78.78
  • 75.22
  • 71.67
  • 71.33
  • 67.44
  • 67.34
  • 63.81
  • 61.15
  • 60.00
  • 54.18
  • 51.42
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.69e3
  • 5.69e3
80.96
  • 80.96
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.86e3
  • 5.86e3
80.37
  • 80.37
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.14e3
  • 6.14e3
79.44
  • 79.44
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
6.36e3
  • 6.36e3
  • 6.53e3
  • 7.70e3
78.71
  • 78.71
  • 78.14
  • 74.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.39e3
  • 6.39e3
  • 7.09e3
78.60
  • 78.60
  • 76.26
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.68e3
  • 6.68e3
  • 1.16e4
77.63
  • 77.63
  • 61.08
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.04e3
  • 7.04e3
76.44
  • 76.44
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.24e3
  • 7.24e3
75.76
  • 75.76
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
8.04e3
  • 8.04e3
  • 9.25e3
  • 9.67e3
  • 9.67e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
  • 9.96e3
  • 1.05e4
  • 1.10e4
73.07
  • 73.07
  • 69.03
  • 67.63
  • 67.63
  • 67.48
  • 66.65
  • 66.65
  • 66.65
  • 64.98
  • 63.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.35e3
  • 8.35e3
72.06
  • 72.06
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.53e3
  • 8.53e3
71.44
  • 71.44
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.86e3
  • 8.86e3
70.35
  • 70.35
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.17e3
  • 9.17e3
69.31
  • 69.31
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.98e3
  • 9.98e3
66.58
  • 66.58
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
  • 1.12e4
63.47
  • 63.47
  • 62.48
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
63.00
  • 63.00
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.51
  • 62.51
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.15
  • 62.15
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.01
  • 59.01
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.26e4
  • 1.26e4
  • 1.28e4
  • 1.39e4
  • 1.39e4
57.68
  • 57.68
  • 57.13
  • 53.55
  • 53.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.58
  • 56.58
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.84
  • 54.84
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.62
  • 54.62
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.07
  • 47.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000037773 (rybpa)
ZFINZDB-GENE-030424-3 (rybpa)
EMBLCT027567
Uniprot/SPTREMBLF1R1S9, F1R1S9_DANRE

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