D. rerio Gene: phlda3 - ENSDARG00000037804 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037804
Namephlda3
Descriptionpleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dz182n13.5, tih1, zgc:92333

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.87e3
  • 4.87e3
83.70
  • 83.70
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.68e3
  • 5.68e3
80.98
  • 80.98
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.02e3
  • 6.02e3
  • 7.41e3
79.85
  • 79.85
  • 75.19
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
79.68
  • 79.68
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
7.13e3
  • 7.13e3
  • 9.10e3
  • 1.07e4
  • 1.12e4
  • 1.18e4
  • 1.19e4
76.14
  • 76.14
  • 69.53
  • 64.24
  • 62.53
  • 60.65
  • 60.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
7.31e3
  • 7.31e3
  • 7.72e3
  • 9.75e3
  • 9.94e3
  • 1.09e4
  • 1.15e4
  • 1.18e4
  • 1.18e4
  • 1.29e4
  • 1.46e4
75.51
  • 75.51
  • 74.15
  • 67.34
  • 66.71
  • 63.46
  • 61.59
  • 60.50
  • 60.37
  • 56.97
  • 51.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.74e3
  • 7.74e3
74.09
  • 74.09
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.77
  • 73.77
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
7.94e3
  • 7.94e3
  • 9.68e3
  • 1.64e4
73.41
  • 73.41
  • 67.58
  • 45.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.13e3
  • 8.13e3
72.78
  • 72.78
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.04e3
  • 9.04e3
  • 1.28e4
69.75
  • 69.75
  • 56.99
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.31e3
  • 9.31e3
  • 1.06e4
68.81
  • 68.81
  • 64.45
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.72e3
  • 9.72e3
  • 1.18e4
  • 1.65e4
67.46
  • 67.46
  • 60.45
  • 44.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
9.93e3
  • 9.93e3
  • 1.18e4
  • 1.19e4
  • 1.20e4
  • 1.21e4
  • 1.23e4
  • 1.25e4
  • 1.28e4
  • 1.30e4
  • 1.31e4
  • 1.33e4
  • 1.34e4
  • 1.38e4
  • 1.46e4
  • 1.49e4
66.77
  • 66.77
  • 60.53
  • 60.16
  • 59.77
  • 59.43
  • 58.79
  • 58.10
  • 57.27
  • 56.62
  • 56.28
  • 55.30
  • 55.19
  • 53.96
  • 51.12
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.31
  • 66.31
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
  • 1.19e4
64.63
  • 64.63
  • 60.10
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.15
  • 62.15
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.14e4
  • 1.14e4
  • 1.25e4
  • 1.25e4
61.85
  • 61.85
  • 58.30
  • 58.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.29
  • 61.29
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.27e4
  • 1.27e4
57.59
  • 57.59
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.40e4
  • 1.40e4
53.14
  • 53.14
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
52.98
  • 52.98
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.28
  • 45.28
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.70
  • 43.70
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.65
  • 42.65
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.24
  • 40.24
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.68
  • 34.68
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.53
  • 31.53
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.05e4
  • 2.05e4
31.35
  • 31.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLAL662880, BC076016
EnsemblENSDARG00000037804 (phlda3)
Uniprot/SWISSPROTPHLA3_DANRE, Q8AW35
ZFINZDB-GENE-030616-267 (phlda3)

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