D. rerio Gene: polr3k - ENSDARG00000037835 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037835
Namepolr3k
Descriptionpolymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92774

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.43e3
  • 2.43e3
91.87
  • 91.87
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.55e3
  • 2.55e3
91.45
  • 91.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.87e3
  • 2.87e3
90.39
  • 90.39
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
89.51
  • 89.51
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
3.32e3
  • 3.32e3
  • 3.78e3
  • 5.47e3
  • 5.73e3
  • 6.03e3
  • 7.35e3
88.89
  • 88.89
  • 87.35
  • 81.67
  • 80.81
  • 79.80
  • 75.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
3.41e3
  • 3.41e3
  • 4.16e3
  • 5.17e3
  • 5.52e3
  • 5.69e3
  • 6.04e3
  • 6.38e3
  • 6.48e3
  • 7.08e3
  • 1.11e4
88.59
  • 88.59
  • 86.06
  • 82.68
  • 81.53
  • 80.95
  • 79.79
  • 78.64
  • 78.30
  • 76.30
  • 62.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.42e3
  • 3.42e3
88.56
  • 88.56
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.64e3
  • 3.64e3
87.83
  • 87.83
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.16e3
  • 4.16e3
86.08
  • 86.08
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.43e3
  • 4.43e3
85.16
  • 85.16
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.46e3
  • 4.46e3
  • 5.31e3
85.06
  • 85.06
  • 82.22
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.62e3
  • 4.62e3
84.54
  • 84.54
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.77e3
  • 4.77e3
  • 7.59e3
84.02
  • 84.02
  • 74.60
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.42
  • 83.42
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000104life cycle
4.98e3
  • 4.98e3
  • 5.59e3
  • 5.99e3
  • 6.04e3
  • 6.24e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.94e3
  • 6.97e3
  • 7.03e3
  • 7.24e3
  • 7.36e3
  • 7.47e3
  • 7.47e3
  • 7.50e3
  • 7.59e3
  • 7.91e3
  • 8.12e3
  • 8.96e3
  • 8.96e3
  • 9.06e3
  • 9.08e3
  • 9.18e3
  • 1.10e4
  • 1.50e4
83.33
  • 83.33
  • 81.29
  • 79.95
  • 79.77
  • 79.12
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.75
  • 76.66
  • 76.46
  • 75.76
  • 75.35
  • 74.99
  • 74.99
  • 74.90
  • 74.58
  • 73.52
  • 72.80
  • 69.99
  • 69.99
  • 69.66
  • 69.59
  • 69.26
  • 63.27
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
5.48e3
  • 5.48e3
  • 5.58e3
  • 8.34e3
  • 8.68e3
  • 9.10e3
81.67
  • 81.67
  • 81.30
  • 72.06
  • 70.95
  • 69.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.74e3
  • 5.74e3
80.78
  • 80.78
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
5.75e3
  • 5.75e3
  • 7.74e3
  • 1.49e4
80.76
  • 80.76
  • 74.09
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.84e3
  • 5.84e3
80.45
  • 80.45
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.26e3
  • 6.26e3
  • 7.74e3
  • 9.96e3
79.05
  • 79.05
  • 74.07
  • 66.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.79e3
  • 6.79e3
77.28
  • 77.28
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.25
  • 77.25
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
6.89e3
  • 6.89e3
  • 9.40e3
  • 9.61e3
  • 9.90e3
76.93
  • 76.93
  • 68.54
  • 67.81
  • 66.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.16e3
  • 7.16e3
76.04
  • 76.04
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.25e3
  • 7.25e3
75.73
  • 75.73
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.38e3
  • 7.38e3
75.30
  • 75.30
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.42e3
  • 7.42e3
75.16
  • 75.16
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.60e3
  • 7.60e3
74.55
  • 74.55
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.81e3
  • 7.81e3
73.86
  • 73.86
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.15e3
  • 8.15e3
72.70
  • 72.70
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.67e3
  • 8.67e3
70.97
  • 70.97
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.53e3
  • 9.53e3
68.08
  • 68.08
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
9.58e3
  • 9.58e3
  • 1.10e4
67.91
  • 67.91
  • 63.17
AEIR
  • AEIR
  • AEIR
UBERON:0002390hematopoietic system
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC076249, CU463855
EnsemblENSDARG00000037835 (polr3k)
Uniprot/SPTREMBLQ6DGU0, Q6DGU0_DANRE
ZFINZDB-GENE-040718-291 (polr3k)

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