D. rerio Gene: taf11 - ENSDARG00000037855 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037855
Nametaf11
DescriptionTAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92784

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
398
  • 398
98.67
  • 98.67
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000036Larval:Day 4
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
846
  • 846
  • 2.18e3
  • 2.40e3
  • 2.54e3
  • 2.60e3
  • 2.76e3
  • 2.78e3
  • 2.87e3
  • 2.92e3
  • 3.24e3
  • 3.80e3
  • 3.83e3
  • 3.85e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.71e3
  • 8.96e3
  • 8.96e3
97.17
  • 97.17
  • 92.71
  • 91.96
  • 91.51
  • 91.30
  • 90.76
  • 90.71
  • 90.40
  • 90.22
  • 89.17
  • 87.26
  • 87.16
  • 87.12
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 70.82
  • 69.99
  • 69.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.26e3
  • 1.26e3
95.78
  • 95.78
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.44
  • 95.44
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.37e3
  • 1.37e3
  • 1.52e3
  • 1.63e3
  • 1.87e3
  • 2.66e3
  • 2.80e3
  • 3.90e3
  • 4.61e3
  • 4.62e3
  • 4.76e3
95.42
  • 95.42
  • 94.91
  • 94.53
  • 93.74
  • 91.09
  • 90.63
  • 86.96
  • 84.57
  • 84.52
  • 84.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.60e3
  • 1.60e3
94.66
  • 94.66
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.82e3
  • 1.82e3
93.90
  • 93.90
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.85e3
  • 1.85e3
  • 3.60e3
93.82
  • 93.82
  • 87.95
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
2.19e3
  • 2.19e3
  • 2.35e3
  • 2.43e3
  • 2.52e3
  • 3.00e3
  • 3.57e3
92.69
  • 92.69
  • 92.14
  • 91.85
  • 91.55
  • 89.95
  • 88.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.22e3
  • 2.22e3
92.58
  • 92.58
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
2.34e3
  • 2.34e3
  • 2.38e3
  • 3.08e3
  • 7.69e3
92.18
  • 92.18
  • 92.02
  • 89.68
  • 74.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
3.06e3
  • 3.06e3
  • 3.07e3
  • 3.59e3
89.75
  • 89.75
  • 89.74
  • 88.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.06e3
  • 3.06e3
89.74
  • 89.74
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.17e3
  • 3.17e3
89.40
  • 89.40
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
89.28
  • 89.28
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
3.64e3
  • 3.64e3
  • 4.42e3
  • 5.06e3
  • 5.73e3
  • 6.78e3
87.80
  • 87.80
  • 85.20
  • 83.07
  • 80.82
  • 77.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.72e3
  • 3.72e3
  • 9.65e3
87.56
  • 87.56
  • 67.68
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.86e3
  • 3.86e3
87.07
  • 87.07
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
4.02e3
  • 4.02e3
  • 5.00e3
86.54
  • 86.54
  • 83.28
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.36
  • 85.36
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.58e3
  • 4.58e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.80e3
  • 4.80e3
83.94
  • 83.94
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.87e3
  • 4.87e3
  • 4.99e3
83.70
  • 83.70
  • 83.29
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.94e3
  • 4.94e3
83.47
  • 83.47
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.26e3
  • 5.26e3
82.41
  • 82.41
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.34e3
  • 5.34e3
82.13
  • 82.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
79.69
  • 79.69
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.13e3
  • 6.13e3
79.48
  • 79.48
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.18e3
  • 6.18e3
79.30
  • 79.30
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.83e3
  • 6.83e3
77.14
  • 77.14
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.49e3
  • 7.49e3
74.91
  • 74.91
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.59e3
  • 9.59e3
67.88
  • 67.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.92
  • 62.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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