D. rerio Gene: si:ch211-194i10.5 - ENSDARG00000037867 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037867
Namesi:ch211-194i10.5
Descriptionsi:ch211-194i10.5 [Source:ZFIN;Acc:ZDB-GENE-131120-154]
OrganismDanio rerio (zebrafish)
Synonym(s)atp5j2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
277
  • 277
  • 316
  • 398
  • 4.23e3
99.07
  • 99.07
  • 98.95
  • 98.67
  • 85.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
304
  • 304
98.99
  • 98.99
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
328
  • 328
  • 520
  • 583
  • 597
  • 686
  • 717
  • 883
  • 1.33e3
  • 1.49e3
  • 1.59e3
98.91
  • 98.91
  • 98.26
  • 98.05
  • 98.00
  • 97.71
  • 97.60
  • 97.05
  • 95.54
  • 95.01
  • 94.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
333
  • 333
  • 378
98.89
  • 98.89
  • 98.74
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
442
  • 442
98.52
  • 98.52
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
456
  • 456
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
510
  • 510
  • 772
  • 784
98.30
  • 98.30
  • 97.42
  • 97.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
510
  • 510
98.30
  • 98.30
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
548
  • 548
98.17
  • 98.17
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
585
  • 585
98.04
  • 98.04
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
637
  • 637
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
638
  • 638
  • 779
97.87
  • 97.87
  • 97.40
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
660
  • 660
  • 716
97.79
  • 97.79
  • 97.60
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
674
  • 674
97.75
  • 97.75
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
681
  • 681
97.72
  • 97.72
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
732
  • 732
97.55
  • 97.55
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
733
  • 733
  • 776
  • 827
  • 955
  • 955
  • 1.12e3
  • 1.19e3
  • 2.32e3
  • 3.32e3
  • 3.83e3
  • 4.70e3
  • 4.87e3
  • 5.54e3
  • 9.16e3
97.55
  • 97.55
  • 97.41
  • 97.24
  • 96.81
  • 96.81
  • 96.24
  • 96.02
  • 92.23
  • 88.89
  • 87.19
  • 84.27
  • 83.70
  • 81.45
  • 69.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
785
  • 785
  • 1.27e3
97.37
  • 97.37
  • 95.75
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
905
  • 905
96.97
  • 96.97
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
927
  • 927
96.90
  • 96.90
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
955
  • 955
96.81
  • 96.81
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
980
  • 980
96.72
  • 96.72
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
988
  • 988
96.70
  • 96.70
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.00e3
  • 1.00e3
96.64
  • 96.64
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.09e3
  • 1.09e3
96.34
  • 96.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.61e3
  • 1.61e3
94.60
  • 94.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.67e3
  • 1.67e3
94.43
  • 94.43
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
1.97e3
  • 1.97e3
  • 3.37e3
  • 3.55e3
  • 3.70e3
  • 4.10e3
  • 4.21e3
93.39
  • 93.39
  • 88.70
  • 88.12
  • 87.60
  • 86.29
  • 85.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.36e3
  • 2.36e3
92.09
  • 92.09
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.68e3
  • 4.68e3
84.32
  • 84.32
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
5.83e3
  • 5.83e3
  • 6.66e3
  • 7.25e3
  • 8.12e3
  • 8.45e3
80.49
  • 80.49
  • 77.70
  • 75.73
  • 72.82
  • 71.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.21e3
  • 6.21e3
79.20
  • 79.20
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.17e4
  • 1.17e4
60.73
  • 60.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAL928657
EnsemblENSDARG00000037867 (si:ch211-194i10.5)
Uniprot/SPTREMBLF6P873, F6P873_DANRE
ZFINZDB-GENE-131120-154 (si:ch211-194i10.5)

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