D. rerio Gene: actb2 - ENSDARG00000037870 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037870
Nameactb2
Descriptionactin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
OrganismDanio rerio (zebrafish)
Synonym(s)actbb, bact2, bactin2, fa56g06, fb38a10, o73815, p12714, q6nwj6, wu:fa56g06, wu:fb38a10
Orthologs(s)36 orthologs
Paralog(s)14 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.00
  • 2.00
100.00
  • 100.00
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.24
  • 6.24
99.98
  • 99.98
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
10.0
  • 10.0
99.97
  • 99.97
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
12.0
  • 12.0
99.96
  • 99.96
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
12.0
  • 12.0
  • 15.0
99.96
  • 99.96
  • 99.95
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
17.0
  • 17.0
99.95
  • 99.95
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
17.3
  • 17.3
99.95
  • 99.95
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
21.6
  • 21.6
  • 3.74e3
99.93
  • 99.93
  • 87.49
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
22.5
  • 22.5
  • 50.5
99.93
  • 99.93
  • 99.83
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
23.9
  • 23.9
99.92
  • 99.92
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
25.0
  • 25.0
  • 88.8
99.92
  • 99.92
  • 99.71
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
25.7
  • 25.7
  • 26.0
  • 41.7
  • 47.5
  • 72.7
99.92
  • 99.92
  • 99.92
  • 99.86
  • 99.84
  • 99.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
27.0
  • 27.0
99.91
  • 99.91
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
28.0
  • 28.0
99.91
  • 99.91
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
35.5
  • 35.5
  • 3.40e3
99.88
  • 99.88
  • 88.62
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
50.0
  • 50.0
  • 62.5
99.84
  • 99.84
  • 99.79
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
59.0
  • 59.0
99.81
  • 99.81
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
61.8
  • 61.8
  • 74.0
  • 3.45e3
99.80
  • 99.80
  • 99.76
  • 88.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
64.6
  • 64.6
  • 3.96e3
99.79
  • 99.79
  • 86.74
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
92.0
  • 92.0
  • 3.45e3
99.70
  • 99.70
  • 88.44
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
110
  • 110
99.63
  • 99.63
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
112
  • 112
99.63
  • 99.63
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
117
  • 117
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
132
  • 132
99.56
  • 99.56
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
234
  • 234
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000049segmentation
  • UBERON:0000068embryo stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • UBERON:0000104life cycle
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000040Larval:Days 14-20
391
  • 391
  • 724
  • 934
  • 967
  • 6.45e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 7.33e3
  • 8.38e3
  • 1.01e4
  • 1.16e4
  • 1.35e4
98.69
  • 98.69
  • 97.58
  • 96.88
  • 96.76
  • 78.40
  • 77.77
  • 77.27
  • 77.27
  • 75.45
  • 71.93
  • 66.13
  • 61.10
  • 54.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
587
  • 587
98.04
  • 98.04
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.97e3
  • 1.97e3
  • 4.72e3
93.41
  • 93.41
  • 84.19
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:0000104life cycle
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
2.04e3
  • 2.04e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
93.18
  • 93.18
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008897fin
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.26e3
  • 2.26e3
  • 3.07e3
92.44
  • 92.44
  • 89.73
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
92.14
  • 92.14
AEIR
  • AEIR
UBERON:0011150pharyngeal arch derived gill
  • UBERON:0000066fully formed stage
2.80e3
  • 2.80e3
90.62
  • 90.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Cross-references

EnsemblENSDARG00000037870 (actb2)
ZFINZDB-GENE-000329-3 (actb2)
EMBLAF025305, AL929031, BC045879, BC067566, BC154531
Uniprot/SPTREMBLA8WG05, A8WG05_DANRE, F1QC15, F1QC15_DANRE
Uniprot/SWISSPROTACTB2_DANRE, Q7ZVF9

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