D. rerio Gene: psmc3ip - ENSDARG00000037892 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037892
Namepsmc3ip
DescriptionPSMC3 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040625-125]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:86785

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.98e3
  • 1.98e3
93.38
  • 93.38
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
92.23
  • 92.23
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
92.14
  • 92.14
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.58e3
  • 2.58e3
91.35
  • 91.35
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.89e3
  • 2.89e3
  • 3.00e3
  • 4.27e3
  • 4.68e3
  • 8.50e3
90.34
  • 90.34
  • 89.95
  • 85.70
  • 84.34
  • 71.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
  • 7.29e3
  • 1.65e4
86.76
  • 86.76
  • 75.58
  • 44.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
4.81e3
  • 4.81e3
  • 5.47e3
  • 6.27e3
  • 6.88e3
  • 6.96e3
  • 8.40e3
  • 8.43e3
  • 9.89e3
  • 1.05e4
  • 1.27e4
83.91
  • 83.91
  • 81.69
  • 79.02
  • 76.97
  • 76.69
  • 71.86
  • 71.78
  • 66.89
  • 65.00
  • 57.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
5.02e3
  • 5.02e3
  • 5.32e3
  • 7.02e3
  • 7.05e3
  • 7.30e3
  • 1.01e4
83.18
  • 83.18
  • 82.18
  • 76.49
  • 76.40
  • 75.57
  • 66.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.05e3
  • 5.05e3
83.08
  • 83.08
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.39e3
  • 5.39e3
81.97
  • 81.97
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.50e3
  • 5.50e3
81.60
  • 81.60
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.01e3
  • 6.01e3
79.87
  • 79.87
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.04e3
  • 6.04e3
79.79
  • 79.79
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.51e3
  • 6.51e3
78.21
  • 78.21
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.52e3
  • 6.52e3
78.18
  • 78.18
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.29
  • 77.29
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.96e3
  • 6.96e3
76.71
  • 76.71
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.12e3
  • 7.12e3
  • 1.84e4
76.17
  • 76.17
  • 38.43
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.22e3
  • 7.22e3
75.81
  • 75.81
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.09e3
  • 8.09e3
72.92
  • 72.92
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000068embryo stage
8.67e3
  • 8.67e3
  • 8.75e3
  • 8.90e3
  • 8.94e3
  • 9.00e3
  • 9.06e3
  • 9.73e3
  • 9.75e3
  • 1.00e4
  • 1.03e4
  • 1.05e4
  • 1.05e4
  • 1.07e4
  • 1.09e4
  • 1.50e4
70.98
  • 70.98
  • 70.69
  • 70.18
  • 70.05
  • 69.87
  • 69.67
  • 67.44
  • 67.37
  • 66.40
  • 65.64
  • 64.81
  • 64.80
  • 64.32
  • 63.40
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.43e3
  • 9.43e3
  • 2.24e4
68.42
  • 68.42
  • 25.01
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.99
  • 64.99
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.47
  • 64.47
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.18
  • 64.18
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.72
  • 63.72
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
  • 1.93e4
62.67
  • 62.67
  • 35.30
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.56
  • 62.56
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.04
  • 62.04
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
  • 1.22e4
60.21
  • 60.21
  • 59.13
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.20e4
  • 1.20e4
  • 1.43e4
  • 1.55e4
59.88
  • 59.88
  • 52.20
  • 48.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
1.30e4
  • 1.30e4
56.41
  • 56.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.97
  • 55.97
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.93
  • 54.93
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.32
  • 47.32
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.08
  • 43.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

Do not show this banner again