D. rerio Gene: cdk5r1a - ENSDARG00000037916 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037916
Namecdk5r1a
Descriptioncyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
OrganismDanio rerio (zebrafish)
Synonym(s)loc568402, zgc:194104, zgc:194109

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
4.85e3
  • 4.85e3
83.77
  • 83.77
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.96e3
  • 4.96e3
83.38
  • 83.38
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.36e3
  • 7.36e3
75.36
  • 75.36
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
9.28e3
  • 9.28e3
  • 1.34e4
  • 2.08e4
  • 2.14e4
  • 2.15e4
68.94
  • 68.94
  • 55.01
  • 30.28
  • 28.35
  • 27.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.03e4
  • 1.03e4
  • 1.73e4
65.46
  • 65.46
  • 42.05
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.28e4
  • 1.28e4
57.08
  • 57.08
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.14
  • 46.14
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.64e4
  • 1.64e4
45.18
  • 45.18
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.86e4
  • 1.86e4
37.61
  • 37.61
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
31.06
  • 31.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC162688, BC162693, BX890565
EnsemblENSDARG00000037916 (cdk5r1a)
Uniprot/SPTREMBLB3DH98, B3DH98_DANRE
ZFINZDB-GENE-080723-17 (cdk5r1a)

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