D. rerio Gene: gna13b - ENSDARG00000037924 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037924
Namegna13b
Descriptionguanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
OrganismDanio rerio (zebrafish)
Synonym(s)fj64c01, galpha 13b, gna13, wu:fj64c01

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.30e3
  • 1.30e3
  • 1.45e3
95.65
  • 95.65
  • 95.16
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.50e3
  • 1.50e3
94.99
  • 94.99
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
2.20e3
  • 2.20e3
  • 3.41e3
92.65
  • 92.65
  • 88.60
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.42e3
  • 2.42e3
91.91
  • 91.91
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
86.51
  • 86.51
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:00072368 cell stage
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000014Blastula:Sphere
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
4.07e3
  • 4.07e3
  • 6.97e3
  • 7.13e3
  • 7.47e3
  • 8.96e3
  • 1.47e4
  • 1.49e4
  • 1.50e4
86.36
  • 86.36
  • 76.66
  • 76.12
  • 74.99
  • 69.99
  • 50.90
  • 50.20
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.09e3
  • 4.09e3
86.31
  • 86.31
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.48e3
  • 4.48e3
85.00
  • 85.00
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.22
  • 84.22
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
5.46e3
  • 5.46e3
  • 5.53e3
  • 5.86e3
  • 7.66e3
  • 1.01e4
81.72
  • 81.72
  • 81.48
  • 80.39
  • 74.35
  • 66.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.91e3
  • 5.91e3
  • 1.23e4
80.23
  • 80.23
  • 58.91
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.96e3
  • 5.96e3
  • 7.95e3
80.05
  • 80.05
  • 73.39
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000036Larval:Day 4
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
  • 9.76e3
77.60
  • 77.60
  • 67.31
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.92e3
  • 6.92e3
76.83
  • 76.83
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.26e3
  • 7.26e3
75.69
  • 75.69
AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.59e3
  • 7.59e3
74.58
  • 74.58
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.96e3
  • 7.96e3
73.35
  • 73.35
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.08e3
  • 8.08e3
72.95
  • 72.95
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.20e3
  • 8.20e3
72.54
  • 72.54
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.66e3
  • 8.66e3
71.01
  • 71.01
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.94e3
  • 8.94e3
70.05
  • 70.05
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.15
  • 66.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.14
  • 65.14
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
1.17e4
  • 1.17e4
  • 1.22e4
  • 1.34e4
  • 1.49e4
60.88
  • 60.88
  • 59.08
  • 54.99
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.20e4
  • 1.20e4
  • 1.34e4
59.98
  • 59.98
  • 55.24
AEIR
  • AEIR
  • AEIR
UBERON:0005805dorsal aorta
  • ZFS:0000029Pharyngula:Prim-5
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.52
  • 51.52
AEIR
  • AEIR
UBERON:0001846internal ear
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0011004pharyngeal arch cartilage
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.50
  • 43.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCU855789
EnsemblENSDARG00000037924 (gna13b)
Uniprot/SPTREMBLF1QHJ3, F1QHJ3_DANRE
ZFINZDB-GENE-030131-8277 (gna13b)

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